Gene Information

Name : SeSA_A1518 (SeSA_A1518)
Accession : YP_002114435.1
Strain : Salmonella enterica CVM19633
Genome accession: NC_011094
Putative virulence/resistance : Virulence
Product : secretion system apparatus protein SsaU
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG4792
EC number : -
Position : 1464335 - 1465393 bp
Length : 1059 bp
Strand : +
Note : 'member of a type III secretion system which is part of a pathogenicity island in Salmonella, Yersinia and pathogenic Escherichia coli'

DNA sequence :
ATGAGCGAGAAAACAGAACAGCCTACAGAAAAGAAATTACGTGATGGCCGTAAGGAAGGGCAGGTCGTCAAAAGTATTGA
AATAACATCATTATTTCAGCTGATTGCGCTTTATTTGTATTTTCATTTCTTTACTGAAAAGATGATTTTGATACTGATTG
CGTCAATAACTTTCACATTACAATTAGTAAATAAGCCATTTTCTTATGCATTAACGCAATTGACTCATGCTTTGATAGAG
TCATTGACTTCTGCACTGCTGTTTCTGGGCGCAGGGGTAATAGTTGCTACTGTGGGTAGCGTGTTTCTTCAGGTGGGGGT
GGTTATTGCCAGCAAGGCCATTGGTTTTAAAAGCGAGCATATAAATCCGGTAAGTAATTTTAAGCAGATATTCTCTTTAC
ATAGCGTAGTGGAATTATGTAAATCCAGCCTAAAAGTTATCATGCTATCTCTTATCTTTGCCTTTTTCTTTTATTATTAT
GCCAGTACTTTTCGGGCACTACCGTACTGTGGGTTAGCCTGTGGCCTGCTTGTAGTTTCTTCTTTAATAAAATGGTTATG
GGTAGGGGTGATGGCTTTTTATATCGTCGTTGGCATACTGGACTATTCTTTTCAATATTATAAGATTAGAAAAGATCTAA
AAATGAGTAAAGATGACGTAAAACAGGAGCATAAAGATCTGGAGGGAGACCCTCAAATGAAGACACGGCGTCGGGAAATG
CAGAGTGAAATACAAAGTGGGAGTTTAGCTCAATCTGTTAAACAATCTGTTGCGGTAGTGCGTAATCCAACGCATATTGC
GGTTTGTCTTGGCTATCATCCCACCGATATGCCAATACCACGCGTTCTGGAAAAAGGTAGTGATGCTCAAGCTAACTATA
TTGTTAACATCGCTGAACGCAACTGCATCCCCGTTGTTGAAAATGTTGAGCTGGCCCGCTCATTATTTTTTGAAGTGGAA
CGTGGAGATAAAATTCCTGAAACGTTATTTGAACCCGTTGCAGCCTTGTTACGTATGGTGATGAAGATAGATTATGCGCA
TTCTACCGAAACACCATAA

Protein sequence :
MSEKTEQPTEKKLRDGRKEGQVVKSIEITSLFQLIALYLYFHFFTEKMILILIASITFTLQLVNKPFSYALTQLTHALIE
SLTSALLFLGAGVIVATVGSVFLQVGVVIASKAIGFKSEHINPVSNFKQIFSLHSVVELCKSSLKVIMLSLIFAFFFYYY
ASTFRALPYCGLACGLLVVSSLIKWLWVGVMAFYIVVGILDYSFQYYKIRKDLKMSKDDVKQEHKDLEGDPQMKTRRREM
QSEIQSGSLAQSVKQSVAVVRNPTHIAVCLGYHPTDMPIPRVLEKGSDAQANYIVNIAERNCIPVVENVELARSLFFEVE
RGDKIPETLFEPVAALLRMVMKIDYAHSTETP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssaU NP_805093.1 secretion system apparatus protein SsaU Virulence SPI-2 Protein 2e-158 99
ssaU CAA68202.1 secretion system apparatus, SsaU Virulence SPI-2 Protein 2e-158 99
ssaU YP_216430.1 secretion system apparatus protein SsaU Virulence SPI-2 Protein 1e-157 99
ssaU NP_460387.1 secretion system apparatus protein SsaU Virulence SPI-2 Protein 3e-158 99
ssaU NP_456106.1 putative type III secretion protein Virulence SPI-2 Protein 2e-158 99
YPO0273 YP_002345355.1 secretion system apparatus protein SsaU Virulence Not named Protein 2e-72 49
escU AFO66307.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 1e-51 41
escU AFO66403.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 1e-51 41
escU AAC38372.1 EscU Virulence LEE Protein 3e-51 41
escU YP_003236100.1 T3SS structure protein EscU Virulence LEE Protein 4e-51 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SeSA_A1518 YP_002114435.1 secretion system apparatus protein SsaU VFG0522 Protein 1e-158 99
SeSA_A1518 YP_002114435.1 secretion system apparatus protein SsaU VFG0718 Protein 2e-51 41