Gene Information

Name : SeSA_A1508 (SeSA_A1508)
Accession : YP_002114425.1
Strain : Salmonella enterica CVM19633
Genome accession: NC_011094
Putative virulence/resistance : Virulence
Product : secretion system apparatus protein SsaL
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1456157 - 1457149 bp
Length : 993 bp
Strand : +
Note : identified by match to protein family HMM PF07018; match to protein family HMM TIGR02511

DNA sequence :
ATGAATATTAAAATTAATGAGATAAAAATGACGCCCCCTACAGCATTTACCCCTGGCCAGGTTATAGAGGAACAAGAGGT
TATTTCGCCTTCAATGTTAGCTCTCCAGGAGTTACAGGAAACGACGGGGGCAGCGCTCTATGAGACGATGGAAGAAATAG
GAATGGCGCTGAGTGGTAAACTGCGCGAAAGTTATAAATTCACTGATGCTGAGAAACTGGAGCGCAGACAACAGGCTTTG
CTGCGTTTGATAAAACAAATACAGGAGGATAATGGGGCAACGTTGCGTCCGCTTACCGAAGAGAATAGTGATCCTGATTT
ACAGAATGCGTATCAAATTATCGCTCTTGCAATGGCGCTTACTGCCGGCGGGTTGTCAAAAAAGAAAAAACGCGATTTGC
AATCGCAACTGGATACGCTTACAGCGGAGGAGGGATGGGAACTTGCCGTTTTTAGTTTACTGGAACTTGGCGAAGTGGAT
ACCGCTACGCTGTCCTCGCTGAAGCGTTTTATGCAACAGGCGATAGACAACGATGAAATGCTCTTATCGCAGTGGTTCAG
ACGCGTGGCAGACTGGCCGGATCGCTGTGAACGGGTCCGTATTTTGCTAAGAGCGATAGCCTTTGAACTTAGCATATGCA
TCGAACCCTCGGAGCAAAGTCGTTTGGCCGCAGCATTAGTACGTTTGCGTCGTTTGTTGTTATTCCTTGGCCTTGAAAAA
GAGTGCCAGCGTGAGGAGTGGATTTGCCAGTTGCCGCCTAATACATTACTGCCGCTACTACTCGATATTATTTGTGAGCG
CTGGCTTTTCAGTGATTGGTTGCTTGATAGACTTACCGCTATAGTTTCTTCATCGAAGATGTTCAATCGGCTACTCCAAC
AACTTGATGCGCAGTTTATGCTGATACCCGATAACTGTTTTAACGACGAAGATCAACGTGAACAAATTCTCGAAACGCTT
CGTGAAGTAAAGGTAAATCAGGTTTTATTCTGA

Protein sequence :
MNIKINEIKMTPPTAFTPGQVIEEQEVISPSMLALQELQETTGAALYETMEEIGMALSGKLRESYKFTDAEKLERRQQAL
LRLIKQIQEDNGATLRPLTEENSDPDLQNAYQIIALAMALTAGGLSKKKKRDLQSQLDTLTAEEGWELAVFSLLELGEVD
TATLSSLKRFMQQAIDNDEMLLSQWFRRVADWPDRCERVRILLRAIAFELSICIEPSEQSRLAAALVRLRRLLLFLGLEK
ECQREEWICQLPPNTLLPLLLDIICERWLFSDWLLDRLTAIVSSSKMFNRLLQQLDAQFMLIPDNCFNDEDQREQILETL
REVKVNQVLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssaL YP_216420.1 secretion system apparatus protein SsaL Virulence SPI-2 Protein 7e-130 99
ssaL NP_460377.1 type III secretion system apparatus protein Virulence SPI-2 Protein 3e-130 99
ssaL CAA70534.1 secretion system apparatus Virulence SPI-2 Protein 2e-130 99
ssaL NP_456116.1 putative secretion system protein Virulence SPI-2 Protein 6e-127 98
ssaL NP_805083.1 secretion system protein Virulence SPI-2 Protein 6e-127 98

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SeSA_A1508 YP_002114425.1 secretion system apparatus protein SsaL VFG0512 Protein 1e-130 99