Gene Information

Name : SeSA_A1494 (SeSA_A1494)
Accession : YP_002114411.1
Strain : Salmonella enterica CVM19633
Genome accession: NC_011094
Putative virulence/resistance : Virulence
Product : secretion system effector protein SseB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1447839 - 1448429 bp
Length : 591 bp
Strand : +
Note : identified by match to protein family HMM PF03433

DNA sequence : 
ATGTCTTCAGGAAACATCTTATGGGGAAGTCAAAGCCCTATTGTGTTTAAAAATAGTTTCGGCGTTAGCAACACTGATAC
CGGGGGGCAGGATGACTTATCCCAGCAAAATCCGTTTGCCGAAGGGTATGGTGTTTTGCTTATTCTCCTTATGGTTATTC
AGGCTATTGCAAACGATAAATTTATTGAAGTCCAGAAGAACGCTGAACGTGCCAGAAATACCCAGGAAAAGTCAAATGAG
ATGGATGAGGTGATTGCTAAAGCAGCCAAAGGGGATGCTAAAACCAAAGAGGAGGTACCTGAGGATGTAATTAAATACAT
GCGTGATAATGGTATTCTCATCGATGGTCTGACCATTGATGAATATATGGCTAAATATGGCGATCATGGGAAGCTGGATA
AAGGTGGTCTACAGGCGGTCAAAGCGGCTTTGGATAACGATGCCAACCGGAATACCGATCTTATGAGTCAGGGGCAGATA
ATAATTCAAAAAATGTCTCAGGAGCTTAACGCTGTCCTTACCCAACTGACAGGGCTTATCAGTAAGTGGGGGGAAATTTC
CAGTATGATAGCGCAGAAAACGTACTCATGA

Protein sequence : 
MSSGNILWGSQSPIVFKNSFGVSNTDTGGQDDLSQQNPFAEGYGVLLILLMVIQAIANDKFIEVQKNAERARNTQEKSNE
MDEVIAKAAKGDAKTKEEVPEDVIKYMRDNGILIDGLTIDEYMAKYGDHGKLDKGGLQAVKAALDNDANRNTDLMSQGQI
IIQKMSQELNAVLTQLTGLISKWGEISSMIAQKTYS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sseB YP_216406.1 secretion system effector protein SseB Virulence SPI-2 Protein 8e-86 98
sseB NP_456130.1 putative pathogenicity island effector effector protein Virulence SPI-2 Protein 4e-85 96
sseB NP_805069.1 pathogenicity island effector protein Virulence SPI-2 Protein 4e-85 96
sseB NP_460363.1 translocation machinery component Virulence SPI-2 Protein 4e-85 96
sseB AAC28879.1 putative secreted protein Virulence SPI-2 Protein 2e-85 96
sseB CAA12185.1 SseB Virulence SPI-2 Protein 2e-85 96

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SeSA_A1494 YP_002114411.1 secretion system effector protein SseB VFG0499 Protein 1e-85 96