Gene Information

Name : SeSA_A1488 (SeSA_A1488)
Accession : YP_002114405.1
Strain : Salmonella enterica CVM19633
Genome accession: NC_011094
Putative virulence/resistance : Virulence
Product : transcriptional regulator, MerR family protein
Function : -
COG functional category : K : Transcription
COG ID : COG0789
EC number : -
Position : 1439227 - 1439955 bp
Length : 729 bp
Strand : -
Note : identified by match to protein family HMM PF00376

DNA sequence : 
ATGTCGTATTCTATCGGCGAATTTGCCAGACTATGCGGTATCAATGCCGCCACGCTAAGGGCATGGCAGCGACGCTATGG
TTTATTGAAACCGCAGCGTACTGATGGCGGGCATCGCTTATACAGCGATGACGATATTCGACAAGCGCTTAGCATCCTCG
ACTGGGTGAGAAAAGGCGTACCGATAAGCCAGGTCAAACCCTTACTATCGCGTCCGGTCATTCGCCTGGGCGATAACTGG
ATAACGATTCAGGAGACGATGCTTCAACATCTCCACGAAGGGCGAATTGACGCGCTGCGGCAGTTGATTTATGACTGTGG
CCGGGAATATCCTCGCGCAGAACTGGTGACCCATTTATTGCGTCCGTTGCGCAGCAAAGTGTCCGCGCATCTTCCCGCCG
TGATGACGCTGCGCGAAATACTGGATGGCATCATTATTGCCTACACCTCTTTTTGCCTTGAAGGCGACAGAAAAGCGCCT
GGCAACAATGCCTTTATTAGCGGATGGCATCTCTCGGATCACTGTGAAATCTGGCTGGAAGCGTTGACTCGTACCGGACA
AGAGCTGCGGCTCAATGTGCTTCCCTCTCCACCAGCCATACTGGCGCCCGAGCTGTTCGCCCAGAGAAAATGGTTCCTGG
TGACCACCGGAAAGCTCACTACCGGGCAGAAAAAACAGCTTGCCCAGTGGCGCAACGTGGTCGCTTCGCTGGAGGTTATC
ACACTATAA

Protein sequence : 
MSYSIGEFARLCGINAATLRAWQRRYGLLKPQRTDGGHRLYSDDDIRQALSILDWVRKGVPISQVKPLLSRPVIRLGDNW
ITIQETMLQHLHEGRIDALRQLIYDCGREYPRAELVTHLLRPLRSKVSAHLPAVMTLREILDGIIIAYTSFCLEGDRKAP
GNNAFISGWHLSDHCEIWLEALTRTGQELRLNVLPSPPAILAPELFAQRKWFLVTTGKLTTGQKKQLAQWRNVVASLEVI
TL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1730 NP_456138.1 putative transcriptional regulator Not tested SPI-2 Protein 3e-104 99
t1258 NP_805061.1 transcriptional regulator Not tested SPI-2 Protein 3e-104 99
SC1411 YP_216398.1 MerR family transcriptional regulator Not tested SPI-2 Protein 3e-103 98
orf242 NP_460355.1 regulatory protein Not tested SPI-2 Protein 1e-103 98
ORF 242 CAB37409.1 - Not tested SPI-2 Protein 9e-104 98

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SeSA_A1488 YP_002114405.1 transcriptional regulator, MerR family protein VFG0491 Protein 5e-104 98