Gene Information

Name : SeSA_A1484 (SeSA_A1484)
Accession : YP_002114402.1
Strain : Salmonella enterica CVM19633
Genome accession: NC_011094
Putative virulence/resistance : Virulence
Product : response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG4566
EC number : -
Position : 1437052 - 1437690 bp
Length : 639 bp
Strand : +
Note : identified by match to protein family HMM PF00072; match to protein family HMM PF00196; match to protein family HMM PF08281

DNA sequence : 
ATGAACATGGGGGCAGGGATGGCGACAATTCATCTACTGGATGATGATACGGCGGTCACTAACGCGTGCGCGTTTTTACT
GGAAAGTCTGGGATATGACGTAAAATGCTGGACGCAGGGGGCGGATTTTTTGGCGCAGGCCAGTCTGTATCAGGCCGGAG
TCGTATTACTGGATATGCGAATGCCGGTACTGGATGGGCAGGGCGTTCATGATGCGTTGCGCCAGTGCGGAAGTACTCTG
GCGGTTGTTTTTCTTACCGGGCATGGCGATGTGCCGATGGCCGTGGAGCAGATGAAACGCGGCGCCGTCGATTTTCTGCA
AAAACCGGTATCGGTAAAACCGCTACAGGCGGCGCTGGAGCGTGCGCTGACGGTTTCATCGGCAGCGGTGGCGCGCCGTG
AGATTATACTGTGTTACCAGCAGTTGACGCCGAAAGAGCGTGAGCTGGCCAGCCTGGTGGTAAAAGGATTTATGAACCGT
GAAATTGCGGAAGCGATGAATATCGCGGTGCGCACCGTAGAGGTGCACCGCGCCAGAGTCATGGAAAAAATGCAGGCCGG
TAGCCTGGCGGAACTGATTAGGCGTTTCGAAAAAATGGCCTCGCCAGAGACCAGAATACGAACAACGTATGAGCCATGA

Protein sequence : 
MNMGAGMATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQGVHDALRQCGSTL
AVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVSSAAVARREIILCYQQLTPKERELASLVVKGFMNR
EIAEAMNIAVRTVEVHRARVMEKMQAGSLAELIRRFEKMASPETRIRTTYEP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrR NP_460352.2 response regulator Virulence SPI-2 Protein 2e-97 99
ttrR CAB37412.1 TtrR Virulence SPI-2 Protein 8e-95 99
ttrR YP_216395.1 tetrathionate reductase complex: response regulator Virulence SPI-2 Protein 1e-94 99
ttrR NP_456141.1 putative two-component response regulator Not tested SPI-2 Protein 1e-94 99
ttrR NP_805058.1 two-component response regulator Virulence SPI-2 Protein 1e-94 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SeSA_A1484 YP_002114402.1 response regulator VFG0488 Protein 8e-98 99