Gene Information

Name : SeSA_A1483 (SeSA_A1483)
Accession : YP_002114401.1
Strain : Salmonella enterica CVM19633
Genome accession: NC_011094
Putative virulence/resistance : Virulence
Product : sensor-kinase
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG4191
EC number : -
Position : 1435347 - 1437095 bp
Length : 1749 bp
Strand : +
Note : identified by match to protein family HMM PF00512; match to protein family HMM PF02518

DNA sequence :
GTGTTGGCGGCAGTAGGGCTACTTTGTCATCGCGCGTGGGCAGGGACGTGGAATATCGGTATTTTGGCCATGCGCGGTGA
GGCGTCTACGCGTAGCCACTGGCAACCGTTGGCAAAGACACTAAGCCAACAGCTTCCAGGCGAAACCTTTCACATCCAGC
CGCTGGATCTGCATCAAATGCAGGAGGCCGTTAACCAGGGAACCGTGCAGTTTGTGATAACCAACCCGGCACAATTTGTC
CAACTGAACAGCCATGCGCCGCTGCGCTGGTTAGCTTCCCTGCGTTCCACGCGCGATGGGAAAGCGGTGAGTAATGTTAT
TGGCAGCGTGATTTTGACCCGGCGCGATAGCGGCATCACCACGGCGCATGATCTCATCGGTAAGACAGTCGGCGCGATTG
ATGCTCAGGCGTTTGGCGGCTATTTATTAGGCTATAAAGCGCTCAGCGACGCGGGCTTACGCCCGGAGCGCGATTTTCAT
CTTCGTTTTACCGGATTTCCTGGCGATGCCTTAGTCTATATGCTGCGCGAAAAAGCGGTGCAGGCGGCAATTGTGCCAGT
GTGTCTGTTAGAAAATATGGATCAGGAAGGATTGATTAATAAAAAGGACTTTATCGCGCTGCTTTCCCGACCGACGCCCC
TGCCTTGCTTAACCAGTACGCCGTTATATCCTGACTGGTCGTTCGCGGCGCTACCTGCGGTAAGCGATGCGCTGGCGGAT
CGCGTAACGCGAGCGCTATTCAACGCGCCCGCCGCCGCGTCATTTCACTGGGGCGCGCCTGCGTCCACCAGTCAGGTGGA
AGCGTTGCTGCGTGATGTTCGTCAGCACCCTCAGCAGCGTCGACTGTGGCTGGATGTCAAAAGTTGGTTAATCCAGCACC
AGCTAATAGTCGGCGGCGTGATTCTGGCGTTCCTGTTGCTCACGCTCAATTATATTTGGGTCATGCTGCTGGTGCGTCGA
CGCGGAAAGCAACTGGAACGTAATAGCGTAGTTCTTCATCAGCATGAGCGGGCGCTGGAAACCGCCCGGCAAATGAGCGT
GTTGGGTGAAATGACCTCCGGGTTTGCCCATGAGCTTAATCAGCCGCTTTCCGCGATTCGACATTATGCCCAGGGGTGCC
TGATTCGACTGCGCGCTGCAGATGAACAGCATCCCTTGCTGCCGGCGCTGGAGCAGATTGACCAGCAGGCGCAACGCGGT
GCGGATACTTTGCGTAACCTGCGTCACTGGGTTAGCCAGGCGCAGGGCAACCCGGTGCTAACCGAAGCGTGGAAGGCTAT
AGCCATTCGCGAGGCGATTGATCATGTCTGGCAATTGTTGCGTATGGCGCAACAGTTTCCGACAGTGAGTCTGCATACCG
AGGTTAGCGCTGCGCTGCGCGTAACGCTGCCGTCAATGCTGCTGGAACAGGTGCTGGCGAATATCATTCTTAATGCGGCT
CAGGCGGGCGCCACCCATTTATGGGTCATTGCTGAACGCACTGAAAACGGCATCAGTATCGTTTTACAGGATAACGCCGG
GGGAATCGACGAGGCGCTATTACGTCAGGCGTTTCAGCCGTTTATGACCACCCGCAAAGAGGGGATGGGCTTAGGGCTGG
CGATTTGCCAGCGGCTGGTGCGGTATGGGCGGGGCGATATCAGCATCAGGAACCAGACCGCGCCGGACGGTCTGTCGGGA
ACGGTGGTCACGATACATTTCTTACATGAACATGGGGGCAGGGATGGCGACAATTCATCTACTGGATGA

Protein sequence :
MLAAVGLLCHRAWAGTWNIGILAMRGEASTRSHWQPLAKTLSQQLPGETFHIQPLDLHQMQEAVNQGTVQFVITNPAQFV
QLNSHAPLRWLASLRSTRDGKAVSNVIGSVILTRRDSGITTAHDLIGKTVGAIDAQAFGGYLLGYKALSDAGLRPERDFH
LRFTGFPGDALVYMLREKAVQAAIVPVCLLENMDQEGLINKKDFIALLSRPTPLPCLTSTPLYPDWSFAALPAVSDALAD
RVTRALFNAPAAASFHWGAPASTSQVEALLRDVRQHPQQRRLWLDVKSWLIQHQLIVGGVILAFLLLTLNYIWVMLLVRR
RGKQLERNSVVLHQHERALETARQMSVLGEMTSGFAHELNQPLSAIRHYAQGCLIRLRAADEQHPLLPALEQIDQQAQRG
ADTLRNLRHWVSQAQGNPVLTEAWKAIAIREAIDHVWQLLRMAQQFPTVSLHTEVSAALRVTLPSMLLEQVLANIILNAA
QAGATHLWVIAERTENGISIVLQDNAGGIDEALLRQAFQPFMTTRKEGMGLGLAICQRLVRYGRGDISIRNQTAPDGLSG
TVVTIHFLHEHGGRDGDNSSTG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrS CAB37413.1 TtrS Virulence SPI-2 Protein 0.0 99
ttrS YP_216394.1 tetrathionate reductase complex: sensory transduction histidine kinase Virulence SPI-2 Protein 0.0 99
ttrS NP_460351.1 sensory histidine kinase Virulence SPI-2 Protein 0.0 99
ttrS NP_805057.1 hypothetical protein Virulence SPI-2 Protein 0.0 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SeSA_A1483 YP_002114401.1 sensor-kinase VFG0487 Protein 0.0 99