Gene Information

Name : hpcD (SeSA_A1168)
Accession : YP_002114102.1
Strain : Salmonella enterica CVM19633
Genome accession: NC_011094
Putative virulence/resistance : Unknown
Product : 5-carboxymethyl-2-hydroxymuconate delta-isomerase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG3232
EC number : 5.3.3.10
Position : 1150507 - 1150887 bp
Length : 381 bp
Strand : +
Note : identified by match to protein family HMM PF02962

DNA sequence :
ATGCCGCACTTTATTGCTGAATGTACTGAAAATATTCGCGAGCAGGCTGATTTACCAAGCCTGTTCAGCAAAGTAAACGA
GGCGCTGGCCGCCAGCGGGATTTTCCCCATCGGCGGTATCCGCAGTCGCGCCCACTGGCTGGATACCTGGCAGATGGCTG
ACGGTAAGCATGATTACGCGTTTGTGCATATGACGCTGAAAATCGGTGCCGGGCGCAGCCTGGAGAGCCGTCAGGAAGTT
GGCGAAATGCTGTTTGGGCTGATTAAAGCCCACTTCGCCGACCTGATGGAGAACCGCTATCTGGCGCTGTCGTTTGAGAT
TGCCGAGCTACATCCGACGCTCAATTACAAACAAAACAACGTACACGCGTTATTTAAATAG

Protein sequence :
MPHFIAECTENIREQADLPSLFSKVNEALAASGIFPIGGIRSRAHWLDTWQMADGKHDYAFVHMTLKIGAGRSLESRQEV
GEMLFGLIKAHFADLMENRYLALSFEIAELHPTLNYKQNNVHALFK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hpaF AAO17181.1 HpaF Not tested tcd island Protein 2e-48 81