Gene Information

Name : SeSA_A1155 (SeSA_A1155)
Accession : YP_002114089.1
Strain : Salmonella enterica CVM19633
Genome accession: NC_011094
Putative virulence/resistance : Virulence
Product : inositol phosphate phosphatase SopB
Function : -
COG functional category : -
COG ID : -
EC number : 3.1.3.-
Position : 1136902 - 1138587 bp
Length : 1686 bp
Strand : -
Note : identified by match to protein family HMM PF05925

DNA sequence :
ATGCAAATACAGAGCTTCTATCACTCAGCTTCACTAAAAACCCAGGAGGCTTTTAAAAGCCTACAAAAAACCTTATACAA
CGGAATGCAGATTCTCTCAGGCCAGGGCAAAGCGCCGGCTAAAGCGCCCGACGTTCGCCCGGAAATTATTGTCCTGCGAG
AACCCGGCGCGACATGGGGGAATTATCTACAGCATCAGAAGACGTCTAACCACTCGCTGCATAACCTCTATAACTTACAG
CGCGATCTTCTTACCGTCGCGGCAACCGTTCTGGGTAAACAAGACCCGGTTCTAACGTCAATGGCAAACCAAATGGAGTT
AGCCAAAGTTAAAGCGGACCGGCCAGCAACAAAACAAGAAGAAGCCGCGGCAAAAGCATTGAAGAAAAATCTTATCGAAC
TTATTGCAGCACGCACTCAGCAGCAAAATGGCCTACCTGCAAAAGAAGCTCATCGCTTTGCGGCAGTAGCGTTTAGAGAT
GCTCAGGTCAAGCAGCTTAATAACCAGCCCTGGCAAACCATAAAAAATACACTCACGCATAACGGGCATCACTATACCAA
CACGCAGCTCCCTGCCGCAGAGATGAAAATTGGCGCAAAAGATATCTTTCCCAGTGCTTATCAGGGAAAGGGCGTATGCA
GTTGGGATACCAGGAATATTCATCACGCCAACAATTTGTGGATGTCCACGGTGAGTGTGCATGAGGACGGTAAAGATAAA
ACGCTCTTTTGCGGGATACGTCATGGCGTGCTTTCCCCCTATCATGAAAAAGATCCGCTTCTGCGTCAGGTCGGCGCTGA
AAACAAAGCCAAAGAAGTATTAACTGCGGCACTTTTTAGTAAACCTGAGTTGCTTAACAGAGCCTTAGAGGGCGAAGCGG
TAAGCCTGAAACTGGTATCCGTCGGGTTACTCACCGCGTCGAATATTTTCGGCAAAGAGGGAACGATGGTCGAGGATCAA
ATGCGCGCATGGCAATCGTTGACCCAGCCGGGAAAAATGATTCATTTAAAAATCCGCAATAAAGATGGCGATCTACAGAC
GGTAAAAATAAAACCGGACGTCGCCGCATTTAATGTGGGTGTTAATGAGCTGGCGCTCAAGCTCGGCTTTGGCCTTAAGG
CATCGGATAGATATAATGCCGAAGCGCTACATCAGTTATTAGGCAATGATTTACGCCCTGAAGCCAGACCTGGTGGCTGG
GTTGGCGAATGGCTGGCGCAATACCCGGATAATTATGAGGTCGTCAATACATTAGCGCGCCAGATTAAGGATATCTGGAA
AAATAACCTACATCATAAAGATGGCGGTGAACCCTATAAACTCGCACAACGCCTTGCCATGTTAGCCCATGAAATTGACG
CGGTGCCCGCCTGGAATTGTAAAAGCGGCAAAGATCGTACAGGGATGATGGATTCAGAAATCAAGCGAGAGCACATTTCT
TTACATCAGACCCATATGTTAAGTGCGCCTGGTAGTCTTCCGGATAGCGGTGGACAGAAAATTTTCCAAAAAGTATTACT
GAATAGCGGCAACCTGGAGATTCAGAAACAAAATACGGGCGGGGCGGGAAACAAAGTAATGAAAAATTTATCGCCAGAGG
TGCTCAATCTTTCCTATCAAAAACGAGTTGGGGATGAAAATATTTGGCAGTCAGTAAAAGGCATTTCTTCATTAATCACA
TCTTGA

Protein sequence :
MQIQSFYHSASLKTQEAFKSLQKTLYNGMQILSGQGKAPAKAPDVRPEIIVLREPGATWGNYLQHQKTSNHSLHNLYNLQ
RDLLTVAATVLGKQDPVLTSMANQMELAKVKADRPATKQEEAAAKALKKNLIELIAARTQQQNGLPAKEAHRFAAVAFRD
AQVKQLNNQPWQTIKNTLTHNGHHYTNTQLPAAEMKIGAKDIFPSAYQGKGVCSWDTRNIHHANNLWMSTVSVHEDGKDK
TLFCGIRHGVLSPYHEKDPLLRQVGAENKAKEVLTAALFSKPELLNRALEGEAVSLKLVSVGLLTASNIFGKEGTMVEDQ
MRAWQSLTQPGKMIHLKIRNKDGDLQTVKIKPDVAAFNVGVNELALKLGFGLKASDRYNAEALHQLLGNDLRPEARPGGW
VGEWLAQYPDNYEVVNTLARQIKDIWKNNLHHKDGGEPYKLAQRLAMLAHEIDAVPAWNCKSGKDRTGMMDSEIKREHIS
LHQTHMLSAPGSLPDSGGQKIFQKVLLNSGNLEIQKQNTGGAGNKVMKNLSPEVLNLSYQKRVGDENIWQSVKGISSLIT
S

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sigD NP_455588.1 cell invasion protein Virulence SPI-5 Protein 0.0 99
sopB YP_216030.1 outer protein Virulence SPI-5 Protein 0.0 99
sopB NP_460064.1 secreted effector protein Virulence SPI-5 Protein 0.0 99
sopB AAC33723.1 SopB Virulence SPI-5 Protein 0.0 97
sopB AAK27355.1 SopB Virulence SPI-5 Protein 0.0 92
sopB AAK27356.1 SopB Virulence SPI-5 Protein 9e-175 87
sopB AAK27357.1 SopB Virulence SPI-5 Protein 8e-160 79

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SeSA_A1155 YP_002114089.1 inositol phosphate phosphatase SopB VFG0465 Protein 0.0 99
SeSA_A1155 YP_002114089.1 inositol phosphate phosphatase SopB VFG0992 Protein 1e-83 48