Gene Information

Name : SeSA_B0084 (SeSA_B0084)
Accession : YP_002112963.1
Strain :
Genome accession: NC_011092
Putative virulence/resistance : Resistance
Product : streptomycin phosphotransferase B
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG3570
EC number : -
Position : 71907 - 72689 bp
Length : 783 bp
Strand : -
Note : identified by match to protein family HMM PF04655

DNA sequence :
ATGTTCATGCCGCCTGTTTTTCCTGCTCATTGGCACGTTTCGCAACCTGTTCTCATTGCGGACACCTTTTCCAGCCTCGT
TTGGAAAGTTTCATTGCCAGACGGGACTCCTGCAATCGTCAAGGGATTGAAACCTATAGAAGACATTGCTGATGAACTGC
GCGGGGCCGACTATCTGGTATGGCGCAATGGGAGGGGAGCAGTCCGGTTGCTCGGTCGTGAGAACAATCTGATGTTGCTC
GAATATGCCGGGGAGCGAATGCTCTCTCACATCGTTGCCGAGCACGGCGACTACCAGGCGACCGAAATTGCAGCGGAACT
AATGGCGAAGCTGTATGCCGCATCTGAGGAACCCCTGCCTTCTGCCCTTCTCCCGATCCGGGATCGCTTTGCAGCTTTGT
TTCAGCGGGCGCGCGATGATCAAAACGCAGGTTGTCAAACTGACTACGTCCACGCGGCGATTATAGCCGATCAAATGATG
AGCAATGCCTCGGAACTGCGTGGGCTACATGGCGATCTGCATCATGAAAACATCATGTTCTCCAGTCGCGGCTGGCTGGT
GATAGATCCCGTCGGTCTGGTCGGTGAAGTGGGCTTTGGCGCCGCCAATATGTTCTACGATCCGGCTGACAGAGACGACC
TTTGTCTCGATCCTAGACGCATTGCACAGATGGCGGACGCATTCTCTCGTGCGCTGGACGTCGATCCGCGTCGCCTGCTC
GACCAGGCGTACGCTTATGGGGGGCACCTCAGAAAACGGAAAATAAAGCACGCTAAGGCATAG

Protein sequence :
MFMPPVFPAHWHVSQPVLIADTFSSLVWKVSLPDGTPAIVKGLKPIEDIADELRGADYLVWRNGRGAVRLLGRENNLMLL
EYAGERMLSHIVAEHGDYQATEIAAELMAKLYAASEEPLPSALLPIRDRFAALFQRARDDQNAGCQTDYVHAAIIADQMM
SNASELRGLHGDLHHENIMFSSRGWLVIDPVGLVGEVGFGAANMFYDPADRDDLCLDPRRIAQMADAFSRALDVDPRRLL
DQAYAYGGHLRKRKIKHAKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
strB AEA34676.1 aminoglycoside resistance protein B Not tested Not named Protein 1e-113 100
BJAB0868_00285 YP_008211611.1 Streptomycin 6-kinase Not tested AbaR26 Protein 2e-113 100
strB YP_001800933.1 aminoglycoside-6-phosphotransferase Not tested Not named Protein 2e-113 100
strB ACK44538.1 StrB Not tested SGI1 Protein 6e-115 100
ABK1_0257 YP_005512829.1 Streptomycin resistance protein B Not tested AbaR4d Protein 9e-115 100
strB AGK07030.1 StrB streptomycin phosphotransferase Not tested SGI1 Protein 6e-115 100
ABZJ_00265 YP_005524221.1 streptomycin 3''-kinase Not tested AbaR22 Protein 9e-115 100
strB AGK07088.1 StrB streptomycin phosphotransferase Not tested SGI1 Protein 6e-115 100
strB YP_005176179.1 aminoglycoside 6-phosphotransferase protein Not tested ICEPmu1 Protein 9e-115 100
strB AFV47971.1 streptomycin (6) phosphotransferase StrB Not tested AbaR25 Protein 6e-115 100
strB AEQ20908.1 StrB, APH(6)-Id streptomycin(6) phosphtransferase Not tested Tn6166 Protein 9e-115 100
strB AFV47999.1 streptomycin (6) phosphotransferase StrB Not tested delta-AbaR25 Protein 6e-115 100
strB AEZ06048.1 StrB, APH(6)-Id, streptomycin(6) phosphotransferase Not tested Tn6167 Protein 9e-115 100
BJAB07104_00281 YP_008207746.1 Streptomycin 6-kinase Not tested AbaR25 Protein 2e-113 100
strB AFH57206.1 streptomycin resistance protein Not tested AbaR4a Protein 7e-115 100
strB CAJ77026.1 Streptomycin phosphotransferase B Not tested AbaR1 Protein 2e-112 99

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SeSA_B0084 YP_002112963.1 streptomycin phosphotransferase B DQ464881.1.gene5.p01 Protein 4e-115 100
SeSA_B0084 YP_002112963.1 streptomycin phosphotransferase B AF024602.1.gene6.p01 Protein 4e-115 100
SeSA_B0084 YP_002112963.1 streptomycin phosphotransferase B NC_010410.6003392.p0 Protein 1e-112 99
SeSA_B0084 YP_002112963.1 streptomycin phosphotransferase B AJ313522.gene.p01 Protein 1e-99 90