Gene Information

Name : SeSA_B0037 (SeSA_B0037)
Accession : YP_002112917.1
Strain :
Genome accession: NC_011092
Putative virulence/resistance : Virulence
Product : transposon Tn21 resolvase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1961
EC number : -
Position : 36524 - 37141 bp
Length : 618 bp
Strand : -
Note : identified by match to protein family HMM PF00239; match to protein family HMM PF02796

DNA sequence : 
TTGACATATTCCGTCAAAGGTAATAGATTTCATCCTGACACTTTTGCCTTTGGAGGCATCTTGCAAGGTCAACGCATCGG
CTATGTCCGCGTCAGCAGCTTCGACCAGAACCCGGAACGGCAATTGGAGGGTGTTCAGGTGGCGCGGGTGTTCACCGACA
AGGCTTCTGGCAAGGACACCCAGCGTCCCGAGCTGGAAAGGCTGCTGGCCTTCGTCCGCGAGGGCGACACCGTGGTGGTG
CATAGCATGGACAGGCTGGCACGCAACCTTGATGACCTGCGCCGCATCGTCCAAGGGCTGACACAACGGGGCGTGCGCAT
GGAGTTCGTCAAAGAAGGGCTGAAGTTCACCGGCGAGGACTCACCGATGGCCAATCTGATGCTGTCGGTCATGGGAGCCT
TCGCTGAGTTCGAGCGCGCCCTGATCCGCGAACGTCAGCGCGAGGGAATCGTGCTGGCCAAGCAGCGCGGTGCCTACCGG
GGACGAAAGAAATCGCTGAACAGCGAACAAATTGCCGAGTTGAAACGGCGAGTTGCGGCAGGCGACCAAAAAACCTTGGT
GGCCCGTGACTTCGGCATCAGCCGCGAAACCTTGTACCAGTACCTGCGGGAAGACTGA

Protein sequence : 
MTYSVKGNRFHPDTFAFGGILQGQRIGYVRVSSFDQNPERQLEGVQVARVFTDKASGKDTQRPELERLLAFVREGDTVVV
HSMDRLARNLDDLRRIVQGLTQRGVRMEFVKEGLKFTGEDSPMANLMLSVMGAFAEFERALIRERQREGIVLAKQRGAYR
GRKKSLNSEQIAELKRRVAAGDQKTLVARDFGISRETLYQYLRED

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpR ACF06154.1 resolvase Not tested Tn5036-like Protein 1e-85 100
tnpR ACY75537.1 TnpR Not tested Tn6060 Protein 4e-66 84
tnpR YP_006098373.1 transposon Tn21 resolvase Not tested Tn2411 Protein 7e-64 83
tnpR AAL08439.1 resolvase TnpR Not tested SRL Protein 5e-64 83
tnpR AFV53121.1 Tn21 resolvase Not tested AbGRI2-1 Protein 5e-64 83
res YP_005124341.1 DNA-invertase Not tested Not named Protein 8e-24 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SeSA_B0037 YP_002112917.1 transposon Tn21 resolvase VFG1030 Protein 2e-64 83