Gene Information

Name : kdpB (SeHA_C0827)
Accession : YP_002044737.1
Strain : Salmonella enterica SL476
Genome accession: NC_011083
Putative virulence/resistance : Unknown
Product : potassium-transporting ATPase subunit B
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2216
EC number : 3.6.3.12
Position : 818708 - 820756 bp
Length : 2049 bp
Strand : -
Note : 'One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions'

DNA sequence :
ATGAGTCGCAAGCAACTGGCGCTGTTTGAACCTGTTTTACTCGTACAGGCGCTAACGGATGCCGTAAAAAAATTAAGCCC
ACGCGCCCAGTGGCGTAACCCGGTGATGTTTGTGGTCTGGGCCGGCAGCGTGCTAACCACTCTGTTAACGCTCGCTATGG
TAACAGGACAAATAGCGGGAAGCGCCCTGTTTACAGGGATTATCAGTCTGTGGTTATGGTTCACCGTACTGTTCGCCAAT
TTTGCCGAAGCGCTGGCGGAAGGCCGCAGCAAAGCCCAGGCAAACAGTCTGAAAGGAGTGAAAAAGACCGCGTTCGCTCG
CCGCCTGCGCGCCCCGCGCCATGATGCGCAGGCCGATAACGTGCCCGCCGCTGAACTGCGAAAAGGCGACATTGTCCTGG
TCAAAGCGGGCGATATTATTCCCTGCGACGGCGAGGTCATCGAAGGCGGCGCGTCGGTGGATGAAAGTGCGATTACCGGC
GAATCCGCCCCCGTGATCCGCGAGTCCGGCGGCGATTTCGCCTCTGTCACCGGCGGCACGCGAATTCTTTCCGACTGGCT
GGTGATTGCCTGTAGCGTCAATCCTGGCGAAACCTTTCTTGACCGGATGATCGCGATGGTGGAAGGCGCACAGCGGCGGA
AAACACCTAACGAGATTGCCCTGACGATTTTGCTCATCGCCCTGACCATTGTCTTTTTACTGGCGACCGCCACCCTGTGG
CCCTTCTCCGCCTGGGGCGGTAACGCGGTCAGCGTCACCGTGTTGGTGGCGTTGCTGGTGTGCCTGATCCCCACCACCAT
CGGCGGGCTACTCTCCGCCATTGGCGTAGCCGGAATGAGCCGAATGTTGGGCGCGAACGTCATCGCCACCAGCGGCCGCG
CCGTAGAAGCCGCGGGCGATGTCGACGTGCTGCTGCTGGATAAAACCGGCACTATCACGCTCGGCAACCGCCAGGCGTCC
GATTTTATACCCGCCCGAGGGGTGGACGAACGCACGCTGGCTGACGCCGCGCAGCTCGCTTCGCTGGCCGACGAAACGCC
GGAAGGCCGCAGCATTGTGATCCTCGCCAAACAGCGCTTTAACCTGCGTGAACGCGATGTGCAGTCGCTTCATGCCACCT
TTGTTCCGTTTACCGCGCAAAGCCGCATGAGCGGGATTAATATCGATAACCGGATGATCCGTAAAGGCTCGGTGGACGCG
ATTCGGCGTCATGTCGAGAGCAATGGCGGCCATTTTCCCGCCGATGTCGAGCAAAACGTCGAGAACGTGGCGCGCCTGGG
CGCGACGCCGCTGGTGGTCGTGGAAGGCGCGCGCGTACTGGGTGTTATCGCCCTCAAGGATATCGTTAAAGGCGGCATTA
AAGAACGTTTCGCCCAGCTACGAAAGATGGGCATTAAAACGGTGATGATCACTGGCGATAACCGCCTGACGGCGGCAGCG
ATTGCCGCCGAGGCCGGTGTGGACGATTTTCTTGCCGAAGCCACGCCGGAAGCCAAGCTGGCGCTGATCCGCCAATATCA
GGCGGAAGGACGGCTGGTCGCCATGACCGGCGACGGCACTAACGATGCCCCGGCGCTGGCGCAGGCTGACGTCGCGGTGG
CGATGAACTCCGGCACCCAGGCGGCGAAAGAAGCCGGTAATATGGTGGATCTGGACTCTAACCCGACCAAGTTGATTGAA
GTGGTGCATATCGGTAAGCAGATGCTGATGACGCGCGGCTCGCTCACCACCTTCAGTATCGCGAATGATGTAGCGAAATA
TTTCGCCATTATTCCCGCCGCGTTTGCCGCTACCTATCCGCAGCTAAACGCGCTCAACGTGATGGGGCTGCATTCGCCGA
ACTCCGCCATTCTGAGCGCGGTGATCTTTAACGCCCTGATTATTATTTTTCTGATCCCGCTGGCATTAAAAGGCGTGAGT
TATAAGCCGCTTTCCGCATCGGCCATGCTGCGCCGTAATTTATGGATCTATGGTCTGGGTGGTCTGGTGGTGCCGTTTAT
TGGTATCAAAGTGATTGATGTGCTGCTGACCCTGCTGGGTCTGGCGTGA

Protein sequence :
MSRKQLALFEPVLLVQALTDAVKKLSPRAQWRNPVMFVVWAGSVLTTLLTLAMVTGQIAGSALFTGIISLWLWFTVLFAN
FAEALAEGRSKAQANSLKGVKKTAFARRLRAPRHDAQADNVPAAELRKGDIVLVKAGDIIPCDGEVIEGGASVDESAITG
ESAPVIRESGGDFASVTGGTRILSDWLVIACSVNPGETFLDRMIAMVEGAQRRKTPNEIALTILLIALTIVFLLATATLW
PFSAWGGNAVSVTVLVALLVCLIPTTIGGLLSAIGVAGMSRMLGANVIATSGRAVEAAGDVDVLLLDKTGTITLGNRQAS
DFIPARGVDERTLADAAQLASLADETPEGRSIVILAKQRFNLRERDVQSLHATFVPFTAQSRMSGINIDNRMIRKGSVDA
IRRHVESNGGHFPADVEQNVENVARLGATPLVVVEGARVLGVIALKDIVKGGIKERFAQLRKMGIKTVMITGDNRLTAAA
IAAEAGVDDFLAEATPEAKLALIRQYQAEGRLVAMTGDGTNDAPALAQADVAVAMNSGTQAAKEAGNMVDLDSNPTKLIE
VVHIGKQMLMTRGSLTTFSIANDVAKYFAIIPAAFAATYPQLNALNVMGLHSPNSAILSAVIFNALIIIFLIPLALKGVS
YKPLSASAMLRRNLWIYGLGGLVVPFIGIKVIDVLLTLLGLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kdpB NP_814334.1 potassium-transporting ATPase subunit B Not tested Not named Protein 1e-159 63
ef0088 AAM75291.1 EF0088 Not tested Not named Protein 8e-160 63
kdpB YP_190029.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 2e-132 57
kdpB YP_251949.1 potassium-transporting ATPase subunit B Not tested SCCmec Protein 7e-133 57
kdpB BAA82181.1 potassium-transporting ATPase(B chanin) Not tested Type-II SCCmec Protein 2e-132 57
SAR0071 YP_039539.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 2e-132 57
kdpB(SCCmec) NP_370597.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 2e-132 57
kdpB NP_373310.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 2e-132 57