Gene Information

Name : SeHA_C4737 (SeHA_C4737)
Accession : YP_002048368.1
Strain : Salmonella enterica SL476
Genome accession: NC_011083
Putative virulence/resistance : Virulence
Product : ShiA-like protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4617578 - 4618621 bp
Length : 1044 bp
Strand : -
Note : -

DNA sequence :
ATGAACGACAGATTACGCTTTGAAGTGCACGATAACCTGGGTTATTTTGTATTTCCGGAAACCTGGTTCGGCCCATTACT
GGGTGAGTTTGAAGAACTGCTTGATGCATACGACACAGATGAAATCAGCGAAACGAGTTATATCAACAAACTCAGACGCC
TTGCTCAACGGGAGCCTGACTTTATTGATATACACGCTCATCTGGCATATGCATTTCTGGAGCAGAATGCCCCGCGTAAG
GCACTGAACGCCGCTCTTAAAGGACTGGCGGCAGGTAATCGTCTCATCCCGGAAAGTTTCAGTGGTGAAATCATCTGGAT
GCATCCCGAAAACCGGCCTTATCTGCGCGCACTTTATGCAGCAATTCTCGCAAATGTGCACTTACAGCGTCATCAGGATG
CGGTTATGCTTACTGATAAAATACTGGCATACAATCCTGAAGATAATCAGGGTGCCCGCTGGTTGTTGGGCTCAGAACTG
TTACGAACAGGCGATCATAAGCAAGCCTTCAGTGTACTGAAAGAGCATGCTGATGAATTTTCACCTTACTGGTATGAACT
TGGTCTTCTGCATTTTCTGAATGGGGAACATGTTAAGGCTGCCACAGCTTTTCGTCATGGCTTTGCTACAAACACTTACA
TCGCGGAAATGCTGTGCGGAAATTTGCATCCATTTCCACTTGCTGTGCGGCATAACTTCTCCGGCTCTCTGGATACGGCA
GAAGATTACTATGCAACATACTCACCATTATGGGGACAATATCCGGAAGCATTGCTGTTTGTAAACTGGCTCTATAACCA
TTCCTCTGTGCTGCATGAACGAGCAGAAATCATTAAATGCGCCGAAATGCTGATGCAGGAAGATGATTTCGAAATATGCG
AAAGCATTTTAAGACAGCAGAAGCTGTTGCGGGAAAGAATTGATGAGACACTTTCTGAGGAAATTGTACAGAAATGCAGA
AATATTAACGGTGAATATGTCTGGCCCTGGATATTGCCGTTTTCAGCAGCAGGAATGAAACACTCAAGCATCCAGCATCA
GTAG

Protein sequence :
MNDRLRFEVHDNLGYFVFPETWFGPLLGEFEELLDAYDTDEISETSYINKLRRLAQREPDFIDIHAHLAYAFLEQNAPRK
ALNAALKGLAAGNRLIPESFSGEIIWMHPENRPYLRALYAAILANVHLQRHQDAVMLTDKILAYNPEDNQGARWLLGSEL
LRTGDHKQAFSVLKEHADEFSPYWYELGLLHFLNGEHVKAATAFRHGFATNTYIAEMLCGNLHPFPLAVRHNFSGSLDTA
EDYYATYSPLWGQYPEALLFVNWLYNHSSVLHERAEIIKCAEMLMQEDDFEICESILRQQKLLRERIDETLSEEIVQKCR
NINGEYVWPWILPFSAAGMKHSSIQHQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec34 AAW51717.1 Aec34 Not tested AGI-3 Protein 5e-137 95
shiA NP_839237.1 hypothetical protein Virulence SHI-2 Protein 6e-136 94
shiA NP_709438.1 hypothetical protein Virulence SHI-2 Protein 6e-136 94
shiA AAD44731.1 ShiA Virulence SHI-2 Protein 5e-136 94
shiA AFX83956.1 ShiA family protein Not tested SE-PAI Protein 2e-129 90
c3557 NP_755432.1 ShiA-like protein Not tested PAI I CFT073 Protein 2e-126 86
ECUMN_3323 YP_002414005.1 SHI-2 pathogenicity island protein Virulence Not named Protein 1e-127 86

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SeHA_C4737 YP_002048368.1 ShiA-like protein VFG0599 Protein 3e-136 94
SeHA_C4737 YP_002048368.1 ShiA-like protein VFG1694 Protein 7e-127 86