Gene Information

Name : SeHA_C4681 (SeHA_C4681)
Accession : YP_002048318.1
Strain : Salmonella enterica SL476
Genome accession: NC_011083
Putative virulence/resistance : Virulence
Product : antirestriction protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4567464 - 4567943 bp
Length : 480 bp
Strand : -
Note : identified by match to protein family HMM PF03230

DNA sequence :
ATGAAAATCGTTTCTCAGAACACAACTGCTCTTTCTTCAGCCACAGCACCAGGGAATAACCAGCCCCAACTGGTTGCTAC
TCCCGTCCCTGATGAACAACGTATCAGCTTCTGGCCGCAGCATTTTGGCCTCATTCCACAGTGGGTGACCCTGGAGCCCC
GTGTCTTCGGCTGGATGGACCGTCTGTGCGAAGACTACTGCGGGGGCATCTGGAATCTGTACACCCTGAACAACGGTGGC
GCATTTATGGCACCTGAACCGGATGACGATAATGACGAAACATGGGTACTGTTCAATGTCATGAACGGTAACCGCGCTGA
AATGAGCCCGGAAGCCGCCGGTATTGCCGCCTGTCTGATGACGTACAGCCATCATGCCTGTCGTACGGAATGTTATGCCA
TGACGGTCCATTATTACCGGCTGCGGGATTACGCCCTGCAGCATCCGGAATGCAGCGCCATTATGCGCATCATTGACTGA

Protein sequence :
MKIVSQNTTALSSATAPGNNQPQLVATPVPDEQRISFWPQHFGLIPQWVTLEPRVFGWMDRLCEDYCGGIWNLYTLNNGG
AFMAPEPDDDNDETWVLFNVMNGNRAEMSPEAAGIAACLMTYSHHACRTECYAMTVHYYRLRDYALQHPECSAIMRIID

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL67346.1 intergenic-region protein Not tested PAI II CFT073 Protein 3e-60 92
S3200 NP_838483.1 hypothetical protein Not tested SHI-1 Protein 3e-60 92
SF2995 NP_708769.2 hypothetical protein Not tested SHI-1 Protein 3e-60 92
Z1216 NP_286751.1 hypothetical protein Not tested TAI Protein 2e-62 92
Z1656 NP_287159.1 hypothetical protein Not tested TAI Protein 2e-62 92
c5155 NP_757003.1 hypothetical protein Not tested PAI II CFT073 Protein 3e-61 91
ORF_48 AAZ04457.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 2e-61 91
yfjX YP_854322.1 hypothetical protein Not tested PAI I APEC-O1 Protein 3e-61 91
z1216 CAD33786.1 Z1216 protein Not tested PAI I 536 Protein 2e-66 91
unnamed CAD66202.1 hypothetical protein Not tested PAI III 536 Protein 1e-66 91
ECO103_3588 YP_003223445.1 hypothetical protein Not tested LEE Protein 6e-61 91
unnamed CAI43899.1 hypothetical protein Not tested LEE Protein 3e-60 91
yfjX CAE85200.1 YfjX protein Not tested PAI V 536 Protein 2e-60 89
unnamed CAD42097.1 hypothetical protein Not tested PAI II 536 Protein 5e-65 89
yfjX ADD91703.1 YfjX Not tested PAI-I AL862 Protein 1e-65 88
unnamed CAI43844.1 hypothetical protein Not tested LEE Protein 2e-66 88
aec72 AAW51755.1 Aec72 Not tested AGI-3 Protein 1e-64 87

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SeHA_C4681 YP_002048318.1 antirestriction protein VFG0659 Protein 9e-61 92
SeHA_C4681 YP_002048318.1 antirestriction protein VFG1677 Protein 6e-67 91
SeHA_C4681 YP_002048318.1 antirestriction protein VFG1527 Protein 8e-67 91
SeHA_C4681 YP_002048318.1 antirestriction protein VFG1616 Protein 2e-65 89