Gene Information

Name : SeHA_C4677 (SeHA_C4677)
Accession : YP_002048314.1
Strain : Salmonella enterica SL476
Genome accession: NC_011083
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4565581 - 4565874 bp
Length : 294 bp
Strand : -
Note : identified by match to protein family HMM PF06154

DNA sequence :
GTGACACCCTGTTTCGGCGCCCGTCTGGTGCAGGAGGGCAATCAGTTGCATTACCTTGCCGACCGCGCCGATATCAGAGG
CCGGTTCAGCGACGCGGATGCGTACCACCTGGACCAGGCCTTTCCGCTGCTGATGAAACAACTGGAACTCATGCTCACCA
GCGGTGAACTCAGCCCCCGCCATCAGCATACCGTCACGCTGTATGCCAGAGGGCTGACCTGCGAAGCCGACACCCTCGGC
AGCTGTGGTTACGTTTATCTGGCTGTTTATCCAACATCCGAAACGAAAACGTAA

Protein sequence :
MTPCFGARLVQEGNQLHYLADRADIRGRFSDADAYHLDQAFPLLMKQLELMLTSGELSPRHQHTVTLYARGLTCEADTLG
SCGYVYLAVYPTSETKT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
yeeU ADD91700.1 YeeU Not tested PAI-I AL862 Protein 2e-40 95
ECO103_3591 YP_003223448.1 hypothetical protein Not tested LEE Protein 3e-38 95
aec75 AAW51758.1 Aec75 Not tested AGI-3 Protein 2e-39 92
yeeU CAD42100.1 hypothetical protein Not tested PAI II 536 Protein 6e-39 91
unnamed CAD66206.1 hypothetical protein Not tested PAI III 536 Protein 4e-37 90
yeeU YP_853121.1 antitoxin of the YeeV-YeeU toxin-antitoxin system Virulence PAI IV APEC-O1 Protein 1e-37 89
Z1220 NP_286755.1 structural protein Not tested TAI Protein 2e-36 88
Z1658 NP_287161.1 structural protein Not tested TAI Protein 2e-36 88
yeeU NP_708772.1 structural protein Not tested SHI-1 Protein 1e-38 88
yeeU NP_838486.1 structural protein Not tested SHI-1 Protein 1e-38 88
unnamed AAK00481.1 unknown Not tested SHI-1 Protein 8e-39 88
unnamed AAL08477.1 unknown Not tested SRL Protein 5e-36 85

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SeHA_C4677 YP_002048314.1 hypothetical protein VFG1619 Protein 2e-39 91
SeHA_C4677 YP_002048314.1 hypothetical protein VFG1681 Protein 1e-37 90
SeHA_C4677 YP_002048314.1 hypothetical protein VFG0662 Protein 4e-39 88
SeHA_C4677 YP_002048314.1 hypothetical protein VFG1068 Protein 2e-36 85