Gene Information

Name : SeHA_C4675 (SeHA_C4675)
Accession : YP_002048312.1
Strain : Salmonella enterica SL476
Genome accession: NC_011083
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4564629 - 4565117 bp
Length : 489 bp
Strand : -
Note : -

DNA sequence :
ATGAAACTGGCCCTGACGCTGGAAGCCGACAGCATTAACGTGCAGGCACTGAACATGGGGCGCATTGTCGTTGACGTCGA
TGGTGTTACTCTCGCTGAACTGATTAACGTGGTCTGCGATAACGGTTACTCCCTTCGTGTTGTTGATGAATCTGACCGGG
CATCAGCAGAGCGCACGCCACCATCTGCGGCCCTTACCGGCATACGCTGCAGTACCGCACATATCACGGAAACGGACAAT
GCCTGGTTGTACTCGCTGTCACATCAGACGAATGACACCGGCGAATCAGAATGGATTCATTTCACAGGTAGCGGATATCT
GTTACGTACCGATGCGTGGTCATACCCGGTTTTGCGGCTTAAGCGCCTGGGCCTGTCAAAAACGTTCCGCCGTCTGGTTG
TCACACTTACCCGACGTTATGGCGTCAGTCTCATTCATCTGGATGCCAGCGCTGAATGCCTGCCGGGTTTACCCACTTTC
AACTGGTAA

Protein sequence :
MKLALTLEADSINVQALNMGRIVVDVDGVTLAELINVVCDNGYSLRVVDESDRASAERTPPSAALTGIRCSTAHITETDN
AWLYSLSHQTNDTGESEWIHFTGSGYLLRTDAWSYPVLRLKRLGLSKTFRRLVVTLTRRYGVSLIHLDASAECLPGLPTF
NW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42102.1 hypothetical protein Not tested PAI II 536 Protein 7e-63 96
unnamed AAC31487.1 L0008 Not tested LEE Protein 2e-60 92
unnamed ACU09434.1 conserved hypothetical protein Not tested LEE Protein 2e-60 92
Z1223 NP_286758.1 hypothetical protein Not tested TAI Protein 5e-60 92
Z1662 NP_287164.1 hypothetical protein Not tested TAI Protein 5e-60 92
Z5092 NP_290243.1 hypothetical protein Not tested LEE Protein 3e-60 92
ECs4540 NP_312567.1 hypothetical protein Not tested LEE Protein 3e-60 92
unnamed CAD66208.1 hypothetical protein Not tested PAI III 536 Protein 3e-59 92
unnamed CAI43904.1 hypothetical protein Not tested LEE Protein 2e-58 91
unnamed AAL57574.1 unknown Not tested LEE Protein 1e-51 91
unnamed AAL08479.1 unknown Not tested SRL Protein 4e-59 91
z5092 CAD33790.1 Z5092 protein Not tested PAI I 536 Protein 2e-58 90
c5148 NP_756996.1 hypothetical protein Not tested PAI II CFT073 Protein 8e-57 89
yeeW AAZ04462.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 2e-56 88
yeeW CAE85205.1 YeeW protein Not tested PAI V 536 Protein 4e-57 88
yeeW ADD91698.1 YeeW Not tested PAI-I AL862 Protein 1e-57 88
APECO1_3485 YP_854326.1 hypothetical protein Not tested PAI I APEC-O1 Protein 2e-56 88
yeeW CAI43849.1 YeeW protein Not tested LEE Protein 3e-56 86
yeeW NP_838488.1 hypothetical protein Not tested SHI-1 Protein 1e-56 86
aec77 AAW51760.1 Aec77 Not tested AGI-3 Protein 7e-56 86
yeeW NP_708774.1 hypothetical protein Not tested SHI-1 Protein 1e-56 86
unnamed AAK00483.1 unknown Not tested SHI-1 Protein 1e-49 85
ECO103_3593 YP_003223450.1 hypothetical protein Not tested LEE Protein 2e-54 83

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SeHA_C4675 YP_002048312.1 hypothetical protein VFG1621 Protein 3e-63 96
SeHA_C4675 YP_002048312.1 hypothetical protein VFG0787 Protein 9e-61 92
SeHA_C4675 YP_002048312.1 hypothetical protein VFG1683 Protein 1e-59 92
SeHA_C4675 YP_002048312.1 hypothetical protein VFG1070 Protein 2e-59 91
SeHA_C4675 YP_002048312.1 hypothetical protein VFG1531 Protein 9e-59 90
SeHA_C4675 YP_002048312.1 hypothetical protein VFG0664 Protein 4e-57 86