Gene Information

Name : SeHA_C4673 (SeHA_C4673)
Accession : YP_002048310.1
Strain : Salmonella enterica SL476
Genome accession: NC_011083
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4563469 - 4564338 bp
Length : 870 bp
Strand : -
Note : -

DNA sequence :
ATGATGTCAGATATCACAGCCTCCCGTCCGGAAGTGGTCACCGGGCATACGGACGTTATTTGCTCAACCAGTATCCGCCA
CATTCTGGCTGTACGAAAGAGTACACTGCTGCAAATCGACACACTTATCCGGCAACTGGCTGAAATATCAGCAATGACAG
AAAGTATTGGAGGTAAAACCGCCCGAGACTGGGCCATGAAACAGGATTTTCGCTGCGGTTGCTGGCTGATGGAGAAACCG
GAAACCGCAATGAAAGCCATCACCCGGAATCTCGATCGCGAAATCTGGCGTGACCTGATGCAACGTTCCGGGATGCTTTC
CTTAATGGATGCACAGGCCCGTGATACATGGTACCGGTCACTGGAGTACGATAATTTTCCGGAAATCAGCGAAGCGAACA
TTCTGAGCACATTTGAACAACTACACCAGAACAAAGATGAAGTGTTTGAACGGGGAGTGATCAACGTCTTCAAAGGGCTG
AGCTGGGATTACAAAACCAATTGCCCCTGCAAATTTGGCAGTAAAATTATCGTCAACAACCTGGTGAGGTGGGACCGGTG
GGGGTTTCATCTGAACAACGGCCCACAGGCAGATCGACTTGCCGATCTGGAAAGAATGCTACACCTGTTCAGCGGTAAAC
CGATCCCCGACAACCGGGAAAACATCACCCTTCGTCTGGATGATCACATCCAGTCTGTTCAGGGTAAAGAGGACTATGAA
GATGAGATGTTCAGCATCAGATACTTTAAGAAGGGCTCCGCGCACATCACGTTCAGGAAACCAGAGCTGGTTGACAGGCT
TAATGATATTATTGCCAGACACTACCCGGAAGCCCTGGCAAGCACAGTGAACAAAAGCAGCAAGGCATAA

Protein sequence :
MMSDITASRPEVVTGHTDVICSTSIRHILAVRKSTLLQIDTLIRQLAEISAMTESIGGKTARDWAMKQDFRCGCWLMEKP
ETAMKAITRNLDREIWRDLMQRSGMLSLMDAQARDTWYRSLEYDNFPEISEANILSTFEQLHQNKDEVFERGVINVFKGL
SWDYKTNCPCKFGSKIIVNNLVRWDRWGFHLNNGPQADRLADLERMLHLFSGKPIPDNRENITLRLDDHIQSVQGKEDYE
DEMFSIRYFKKGSAHITFRKPELVDRLNDIIARHYPEALASTVNKSSKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL57572.1 unknown Not tested LEE Protein 1e-124 94
Z1664 NP_287166.1 hypothetical protein Not tested TAI Protein 4e-126 94
unnamed CAI43906.1 hypothetical protein Not tested LEE Protein 5e-124 94
Z1226 NP_286760.1 hypothetical protein Not tested TAI Protein 4e-126 94
z1226 CAD33792.1 Z1226 protein Not tested PAI I 536 Protein 3e-123 93
unnamed CAE85207.1 hypothetical protein Not tested PAI V 536 Protein 1e-123 92
unnamed AAK00485.1 unknown Not tested SHI-1 Protein 8e-121 90
S3207 NP_838489.1 hypothetical protein Not tested SHI-1 Protein 1e-120 90
SF3002 NP_708776.1 hypothetical protein Not tested SHI-1 Protein 1e-120 90
ECO103_3595 YP_003223452.1 hypothetical protein Not tested LEE Protein 8e-121 90
ECO111_3781 YP_003236116.1 hypothetical protein Not tested LEE Protein 2e-122 90
aec79 AAW51762.1 Aec79 Not tested AGI-3 Protein 5e-121 89
ORF_49 AAZ04463.1 hypothetical protein Not tested PAI I APEC-O1 Protein 1e-119 88
APECO1_3484 YP_854327.1 hypothetical protein Not tested PAI I APEC-O1 Protein 2e-119 88
unnamed CAD66210.1 hypothetical protein Not tested PAI III 536 Protein 3e-109 86

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SeHA_C4673 YP_002048310.1 hypothetical protein VFG1533 Protein 1e-123 93
SeHA_C4673 YP_002048310.1 hypothetical protein VFG0666 Protein 4e-121 90
SeHA_C4673 YP_002048310.1 hypothetical protein VFG1685 Protein 2e-109 86