Gene Information

Name : SeHA_C4087 (SeHA_C4087)
Accession : YP_002047788.1
Strain : Salmonella enterica SL476
Genome accession: NC_011083
Putative virulence/resistance : Virulence
Product : transcriptional regulator C
Function : -
COG functional category : K : Transcription
COG ID : COG3710
EC number : -
Position : 3971208 - 3971972 bp
Length : 765 bp
Strand : -
Note : identified by match to protein family HMM PF00486

DNA sequence : 
ATGTTATGGATAATTAACGATAATATTGAATTTAATCCAGAAATGAATCGCCTGGCTTCATTATCGAGGCCAGATCTCAA
CATTATTCTGACAACGCCCGCCAGCCGCTGCTTGCGCCTTCTGCTGGAAAACGCCCCCTCCGTCGTCTCACAACAAACAT
TCTTTCAAAAAGTGTGGGAAGAAGACGGCATGGTGGTGTCGGCAAATACGCTTTATCAGAATATCTCCATTATTCGCCGC
GGATTACGTACCGTTGGCGAAAATGAAGATACGCTGATAATCACGGTTCCGCGTAGAGGCTTTCAGATTGAGCCAGGTGT
GAGCCTCATGACCATCCGCAAAGACTTCGCTCAGGCAATAGAAAAAAAGGGTGAGACGCCACCGCGTATGTCAGGGCGTT
GGTTTAAACATTATGTACCTGTACTTTGGATGACCGGGACATTTGCTGTCGGTATTTTGCTTGGCACTATAAGCTGGCAA
ACCGTTCCCGATAAGGATTTTTACGATCGCTACACGCTGGTTGAAACAACTCAGGGCTGTCATTTTTTCTCGCGGAATGA
AGATATCGAAAGCGGCAGCCGCTTTGCAAGCTATAAGTCAATGATTCTAAAAACCGGTATGGATTGTCAGAAATACCCAT
GGGTCTATTTCCCTTCCAGCAGTCGCACCCCAGCGGTTACGGCATTGATTTGTCAGCAACCTTATAAAACGCGCGGTGAT
ACAGGCTGCGTGACGCTTTTTTTCCGCGGGGTGACACATGGGTAA

Protein sequence : 
MLWIINDNIEFNPEMNRLASLSRPDLNIILTTPASRCLRLLLENAPSVVSQQTFFQKVWEEDGMVVSANTLYQNISIIRR
GLRTVGENEDTLIITVPRRGFQIEPGVSLMTIRKDFAQAIEKKGETPPRMSGRWFKHYVPVLWMTGTFAVGILLGTISWQ
TVPDKDFYDRYTLVETTQGCHFFSRNEDIESGSRFASYKSMILKTGMDCQKYPWVYFPSSSRTPAVTALICQQPYKTRGD
TGCVTLFFRGVTHG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
marT NP_462658.3 transcriptional regulator Not tested SPI-3 Protein 5e-119 100
marT AAD16956.1 putative transcriptional regulator MarT Virulence SPI-3 Protein 2e-118 100
marT YP_218667.1 transcriptional regulatory protein Not tested SPI-3 Protein 4e-118 99
ECs3704 NP_311731.1 sensory transducer Not tested LIM Protein 7e-54 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SeHA_C4087 YP_002047788.1 transcriptional regulator C VFG0570 Protein 2e-119 100