Gene Information

Name : SeHA_C3961 (SeHA_C3961)
Accession : YP_002047668.1
Strain : Salmonella enterica SL476
Genome accession: NC_011083
Putative virulence/resistance : Virulence
Product : pili assembly chaperone
Function : -
COG functional category : N : Cell motility
COG ID : COG3121
EC number : -
Position : 3839758 - 3840456 bp
Length : 699 bp
Strand : -
Note : identified by match to protein family HMM PF00345; match to protein family HMM PF02753

DNA sequence : 
ATGAACCGCTCACGTTTGATATCTTGCACAGCACTGGTGCTGGCGTTGATTGCTCAAAACAGTTTTGCCGGAGGCGTGGC
ATTAAGCAGCACGCGTGTTATTTATGACGGTAGTAGAAAGGAAGCTTCTCTTACGGTAAATAATAAAAGCACCACGGATG
AATTTCTCATTCAGTCATGGATTGATGATGCTAACGGTAATAAAAAGACGCCCTTTATCATCACTCCACCGTTATTTAAA
TTAAGCCCGACTAAAAATAACGTTTTACGTATTGTTAATACGACGAACACGTTACCGCAGGATCGCGAGTCCGTTTATTG
GATTAACGTAAAAGCTATTCCTGCCAAAAGTGAAGACGCGGAAGCTAAAAACGTACTGCAGATCGCCGTACGTACCCGCT
TAAAACTGTTCTATCGCCCGGCGGGCCTGAAAGGCAATAGCATGGACGGCTGGAACAAACTGCAGTTCACCAGCGCAGGG
GCTAACCAGATCAAAGTGGAAAACCCATCTGCCTTTAACCTGACGTTTAATAAATTTTATGCCAACGGCCGTGATATTGA
AAAAACGGGAATGGTTCCGGCAAAAGGCTCATTGAATATTGAACTGCCAGCCGGCACCGGCAAGGTAAGCGAAGTTAAAT
ACAACATTATTAATGACTTTGGCACTGCTGGCGACATGTTGACACAGCGCGTTAACTAA

Protein sequence : 
MNRSRLISCTALVLALIAQNSFAGGVALSSTRVIYDGSRKEASLTVNNKSTTDEFLIQSWIDDANGNKKTPFIITPPLFK
LSPTKNNVLRIVNTTNTLPQDRESVYWINVKAIPAKSEDAEAKNVLQIAVRTRLKLFYRPAGLKGNSMDGWNKLQFTSAG
ANQIKVENPSAFNLTFNKFYANGRDIEKTGMVPAKGSLNIELPAGTGKVSEVKYNIINDFGTAGDMLTQRVN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fim2C AFH78430.1 putative fimbrial chaperone protein Virulence KpGI-5 Protein 2e-40 42
sfaE CAC16952.2 SfaE protein Virulence PAI III 536 Protein 3e-38 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SeHA_C3961 YP_002047668.1 pili assembly chaperone VFG0455 Protein 4e-104 100
SeHA_C3961 YP_002047668.1 pili assembly chaperone VFG1644 Protein 2e-38 42
SeHA_C3961 YP_002047668.1 pili assembly chaperone VFG0911 Protein 2e-38 42
SeHA_C3961 YP_002047668.1 pili assembly chaperone VFG0445 Protein 1e-40 42