Gene Information

Name : SeHA_C3362 (SeHA_C3362)
Accession : YP_002047110.1
Strain : Salmonella enterica SL476
Genome accession: NC_011083
Putative virulence/resistance : Unknown
Product : HpcH/HpaI aldolase/citrate lyase family protein
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG2301
EC number : -
Position : 3271093 - 3271935 bp
Length : 843 bp
Strand : -
Note : identified by match to protein family HMM PF03328

DNA sequence :
ATGCCCGATATTTCTCATACACCGACACGTAGCTGGCTTTTTACCCCAGCAATTCGACCAGAACGTTTCATAAAAGCAGT
TGAAAGTGCGGCGGACATTTCTATTATCGATCTTGAAGATTCCGTCACCCCGAATGACAAGGCGCAGGCCCGGAAAATTG
CGATGCAGTTCCTTTCATCCCGACCAAACTCATCGCTGAAAATAGCATTAAGAATTAATGGAATGAATACTCATGCTGGC
ATTGAAGACCTGCATATGTTACTGGAATGCCGTTTTTTTCCTGATTACATTATTCTTCCGAAAACAGAGTCAGCCGCGCA
CCTGCAAATCGTGGATAGTCTTATCATGATGGCTGGTTCTGATACTCGCCTTATTGGCATTATTGAGTCAGTTGTTGGGC
TTAATGCCGTAGAGTCTATTGCGGACGCCACCCCCAGACTCTGCGGGTTGATGTTTGGCGCCGCAGATATGGCGGCTGAC
ATTGGCGCCACACCCGCCTGGGAGCCTCTTGCGCTGGCGCGGGCCAGAATAGTGGCTGCCTGCGCTATGAAAGGGCTTCT
TGCAATAGATGCTCCCTTCTTTGATATAGGCGATTTTTCAGGTCTGAAAGAGGAAACGCTGCAGGCGCTCAGTTTTGGTT
TTTCTGCAAAATCGGCTATTCACCCCGCTCAGATTAGTGTAATCAACGCCGCATTTACTCCTACAACGGCAGAAATTAAT
CATGCTCGTGCAGTACTGACAGAGAATGCCAAAGGCGTCGGGATCGTTAGCGGCATGATGATAGATGCAGCCGTTGCCCG
TCAGGCCCGGAGATTACTCGCCCGGGCAGGGATCTTTTCCTGA

Protein sequence :
MPDISHTPTRSWLFTPAIRPERFIKAVESAADISIIDLEDSVTPNDKAQARKIAMQFLSSRPNSSLKIALRINGMNTHAG
IEDLHMLLECRFFPDYIILPKTESAAHLQIVDSLIMMAGSDTRLIGIIESVVGLNAVESIADATPRLCGLMFGAADMAAD
IGATPAWEPLALARARIVAACAMKGLLAIDAPFFDIGDFSGLKEETLQALSFGFSAKSAIHPAQISVINAAFTPTTAEIN
HARAVLTENAKGVGIVSGMMIDAAVARQARRLLARAGIFS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
citE AAK97548.1 CitE Not tested SPI-6 Protein 6e-113 100