Gene Information

Name : SeHA_C3085 (SeHA_C3085)
Accession : YP_002046855.1
Strain : Salmonella enterica SL476
Genome accession: NC_011083
Putative virulence/resistance : Virulence
Product : surface presentation of antigens protein SpaK
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3012483 - 3012890 bp
Length : 408 bp
Strand : -
Note : identified by match to protein family HMM PF03519

DNA sequence :
ATGCAACATTTGGATATCGCTGAATTAGTTCGTTCCGCACTGGAAGTAAGTGGTTGCGATCCTTCACTCATCGGAGGAAT
AGATAGCCATTCAACAATTGTTCTGGATTTATTTGCATTGCCAAGTATCTGTATCAGCGTCAAGGACGATGATGTATGGA
TCTGGGCGCAATTGGGTGCTGACAGCATGGTGGTATTACAACAGCGGGCTTATGAAATCTTAATGACCATAATGGAAGGA
TGCCATTTTGCCCGCGGCGGGCAATTACTACTGGGGGAGCAGAATGGGGAGCTAACGCTTAAAGCCTTAGTGCATCCGGA
TTTTTTATCTGACGGTGAAAAGTTCTCTACTGCCTTGAATGGGTTTTACAACTATCTGGAAGTTTTTAGTCGGTCGCTAA
TGAGATGA

Protein sequence :
MQHLDIAELVRSALEVSGCDPSLIGGIDSHSTIVLDLFALPSICISVKDDDVWIWAQLGADSMVVLQQRAYEILMTIMEG
CHFARGGQLLLGEQNGELTLKALVHPDFLSDGEKFSTALNGFYNYLEVFSRSLMR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
spak NP_457289.1 secretory protein (associated with virulence) Virulence SPI-1 Protein 1e-51 100
spak NP_806498.1 virulence-associated secretory protein Virulence SPI-1 Protein 1e-51 100
invB NP_461816.1 secretion chaperone Virulence SPI-1 Protein 1e-51 100
invB YP_217814.1 surface presentation of antigens; secretory proteins Virulence SPI-1 Protein 1e-51 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SeHA_C3085 YP_002046855.1 surface presentation of antigens protein SpaK VFG0556 Protein 4e-52 100