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Name : SeHA_C3072 (SeHA_C3072) Accession : YP_002046844.1 Strain : Salmonella enterica SL476 Genome accession: NC_011083 Putative virulence/resistance : Virulence Product : cell invasion protein SipA Function : - COG functional category : - COG ID : - EC number : - Position : 2999193 - 3001205 bp Length : 2013 bp Strand : - Note : identified by match to protein family HMM PF09052 DNA sequence : ATGCAGACCGAGATCAAAACGCAGGCCACGAATCTTGCGGCGAATCTTTCCGCAGTCAGAGAAAGTGCCACAACGACGCT GTCAGGGGAAATTAAAGGCCCGCAACTGGAAGATTTTCCCGCGCTGATCAAACAGGCGAGTCTGGATGCATTGTTTAAAT GCGGGAAAGACGCTGAGGCGTTAAAAGAAGTTTTTACCAATTCAAATAATGTCGCCGGTAAGAAAGCGATAATGGAGTTT GCCGGGCTCTTTCGTTCAGCGCTCAACGCCACCAGTGATTCTCCTGAGGCGAAGACGCTACTGATGAAGGTGGGGGCAGA GTATACCGCGCAAATCATAAAAGATGGCCTGAAAGAAAAGTCAGCTTTTGGGCCATGGCTGCCAGAAACAAAGAAAGCGG AAGCGAAGCTGGAAAACCTGGAAAAGCAGCTGTTAGATATTATCAAAAATAACACTGGTGGTGAATTAAGTAAATTATCG ACGAATCTTGTTATGCAGGAGGTGATGCCCTATATTGCCAGCTGCATTGAACATAACTTTGGCTGTACGTTAGATCCGTT AACCCGCAGCAATCTTACGCACCTTGTTGACAAAGCGGCGGCGAAGGCGGTTGAGGCGCTTGATATGTGCCACCAAAAAT TAACGCAAGAGCAGGGTACCAGCGTAGGACGGGAAGCCCGGCACCTTGAAATGCAAACGTTGATACCCCTGTTGCTACGT AATGTTTTTGCACAAATTCCTGCAGATAAACTGCCTGACCCTAAAATTCCGGAGCCTGCGGCTGGACCAGTACCTGATGG TGGGAAAAAAGCAGAACCTACGGGTATTAATATCAATATTAATATTGATAGCAGTAACCATAGCGTGGATAACAGTAAGC ATATTAACAATAGCCGAAGCCATGTCGATAATAGCCAGCGCCATATCGATAATAGCAACCATGATAATAGCCGGAAGACG ATTGATAATAGCCGAACATTTATTGATAACAGCCAACGCAATGGCGAGTCACACCATTCGACTAACAGCAGCAACGTAAG TCATAGTCATTCGCGTGTGGATTCGACTACGCATCAAACGGAGACGGCACACAGCGCCAGCACAGGGGCAATTGACCATG GCATCGCGGGTAAAATTGACGTCACGGCTCATGCGACGGCAGAGGCTGTGACCAACGCTTCATCCGAAAGTAAAGATGGA AAGGTGGTCACGTCAGAAAAGGGCACTACGGGTGAAACAACCTCTTTTGATGAAGTCGATGGCGTAACCAGCAAGAGCAT TATCGGCAAGCCGGTACAGGCCACGGTGCACGGCGTTGATGATAATAAACAGCAAAGCCAGACGGCAGAGATTGTGAATG TGAAGCCGCTTGCCAGTCAACTGGCTGGCGTCGAGAATGTTAAAACCGATACCTTACAATCAGACACGACGGTAATTACA GGTAATAAAGCCGGTACGACCGATAATGATAATAGTCAGACAGATAAGACTGGCCCATTTTCTGGTTTGAAGTTTAAGCA AAATAGTTTCCTCTCAACAGTACCGAGCGTTACGAATATGCATTCAATGCATTTCGACGCCCGTGAGACGTTTTTGGGTG TGATACGTAAAGCCCTGGAGCCAGATACCTCCACACCGTTCCCTGTACGCAGAGCGTTTGACGGCTTGCGTGCGGAAATA TTACCCAATGACACGATAAAGAGTGCAGCGTTGAAAGCGCAATGTAGCGATATTGACAAGCACCCAGAATTGAAAGCGAA AATGGAGACTCTCAAAGAGGTCATTACTCATCATCCACAAAAAGAAAAACTGGCTGAGATTGCACTGCAGTTTGCCAGAG AGGCGGGGCTGACCAGGCTAAAAGGGGAAACTGACTATGTGTTAAGTAATGTGCTGGACGGCCTTATCGGAGACGGTAGC TGGCGAGCTGGCCCGGCTTACGAGTCATACCTGAATAAACCTGGCGTGGATCGGGTTATTACTACCGTTGATGGCTTGCA CATGCAGCGTTAA Protein sequence : MQTEIKTQATNLAANLSAVRESATTTLSGEIKGPQLEDFPALIKQASLDALFKCGKDAEALKEVFTNSNNVAGKKAIMEF AGLFRSALNATSDSPEAKTLLMKVGAEYTAQIIKDGLKEKSAFGPWLPETKKAEAKLENLEKQLLDIIKNNTGGELSKLS TNLVMQEVMPYIASCIEHNFGCTLDPLTRSNLTHLVDKAAAKAVEALDMCHQKLTQEQGTSVGREARHLEMQTLIPLLLR NVFAQIPADKLPDPKIPEPAAGPVPDGGKKAEPTGINININIDSSNHSVDNSKHINNSRSHVDNSQRHIDNSNHDNSRKT IDNSRTFIDNSQRNGESHHSTNSSNVSHSHSRVDSTTHQTETAHSASTGAIDHGIAGKIDVTAHATAEAVTNASSESKDG KVVTSEKGTTGETTSFDEVDGVTSKSIIGKPVQATVHGVDDNKQQSQTAEIVNVKPLASQLAGVENVKTDTLQSDTTVIT GNKAGTTDNDNSQTDKTGPFSGLKFKQNSFLSTVPSVTNMHSMHFDARETFLGVIRKALEPDTSTPFPVRRAFDGLRAEI LPNDTIKSAALKAQCSDIDKHPELKAKMETLKEVITHHPQKEKLAEIALQFAREAGLTRLKGETDYVLSNVLDGLIGDGS WRAGPAYESYLNKPGVDRVITTVDGLHMQR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| sipA | YP_217801.1 | cell invasion protein | Virulence | SPI-1 | Protein | 0.0 | 99 |
| sipA | NP_461803.1 | secreted effector protein | Virulence | SPI-1 | Protein | 0.0 | 99 |
| sipA | NP_457276.1 | pathogenicity island 1 effector protein (function unknown) | Virulence | SPI-1 | Protein | 0.0 | 98 |
| sipA | NP_806485.1 | pathogenicity island 1 effector protein | Virulence | SPI-1 | Protein | 0.0 | 98 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SeHA_C3072 | YP_002046844.1 | cell invasion protein SipA | VFG0543 | Protein | 0.0 | 99 |
