|
Name : SeHA_C3068 (SeHA_C3068) Accession : - Strain : Salmonella enterica SL476 Genome accession: NC_011083 Putative virulence/resistance : Virulence Product : - Function : - COG functional category : - COG ID : - EC number : - Position : 2996585 - 2998192 bp Length : 1608 bp Strand : - Note : effector protein SptP; this gene contains a premature stop which may be the result of sequencing error; identified by match to protein family HMM PF09119 DNA sequence : TTGAATAATTTAACGTTGTCTTCGTTTTCAAAAGTTGGTGTGTCGAATGATGCCCGACTTTATATTGCTAAGGAAAATAC TGATAAGGCATATGTTGCGCCTGAAAAATTTTCGTCAAAAGTATTAACCTGGCTTGGAAAAATGCCGTTATTTAAAAACA CTGAAGTGGTGCAAAAACATACGGAAAATATCAGAGTACAGGACCAAAAGATTTTACAGACATTTCTCCATGCACTAACG GAAAAATATGGGGAAACAGCGGTTAATGACGCACTGTTAATGTCCCGTATAAATATGAACAAACCCCTTACCCAACGTTT AGCAGTGCAGATCACGGAGTGTGTAAAAGCTGCTGACTAAGGGTTTATAAACCTTATTAAGAGCAAGGATAATGTTGGTG TCAGGAATGCCGCTTTAGTCATAAAAGGCGGCGATACAAAAGTGGCAGAAAAAAATAACGATGTTGGAGCAGAAAGTAAG CAACCTTTACTCGATATCGCGCTAAAGGGACTTAAAAGAACATTACCGCAACTGGAACAAATGGATGGAAATAGCCTGCG AGAAAACTTCCAGGAGATGGCTTCAGGTAACGGCCCGCTGCGTTCATTAATGACGAATTTACAGAATTTAAATAAAATTC CAGAGGCTAAACAACTTAATGATTATGTTACAACGTTAACAAATATTCAGGTCGGTGTAGCCCGGTTCTCACAATGGGGA ACCTGTGGAGGAGAGGTTGAGAGGTGGGTTGATAAAGCCTCTACTCATGAATTAACCCAGGCTGTAAAAAAAATTCACGT TATTGCTAAAGAACTGAAAAATGTTACAGCTGAACTTGAGAAAATAGAAGCCGGCGCGCCAATGCCACAGACGATGAGCG GACCGACACTGGGCCTGGCACGATTTGCGGTCAGCAGCATTCCAATTAATCAGCAAACCCAGGTGAAACTGAGCGATGGA ATGCCTGTGCCAGTGAATACGTTAACTTTTGACGGTAAGCCTGTGGCATTAGCCGGTTCGTACCCAAAAAATACGCCGGA TGCGCTGGAAGCGCATATGAAAATGCTTCTTGAAAAAGAATGCTCGTGCCTGGTGGTGTTAACGTCGGAAGATCAGATGC AGGCAAAACAATTACCACCCTATTTCAGAGGGAGCTACACCTTTGGCGAGGTGCATACCAACAGCCAAAAAGTGAGCTCA GCCAGTCAGGGAGAAGCGATAGACCAATACAATATGCAACTGTCCTGCGGGGAAAAGCGGTATACAATCCCGGTATTGCA TGTGAAAAATTGGCCAGATCACCAGCCGTTACCGTCTACGGATCAGTTAGAATACCTGGCGGATAGGGTGAAAAATAGTA ACCAAAATGGCGCGCCGGGGCGTAGTTCATCAGATAAGCATTTACCGATGATTCATTGTCTGGGCGGAGTGGGGAGAACC GGAACGATGGCGGCGGCCCTTGTACTTAAGGATAATCCTCATAGTAATCTGGAGCAGGTACGTGCAGATTTCCGGGATTC ACGGAACAATAGAATGCTGGAAGACGCCTCACAGTTTGTACAACTAAAAGCAATGCAAGCCCAGTTGCTTATGACGACGG CAAGCTGA Protein sequence : - |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| sptP | NP_461799.1 | protein tyrosine phosphatase/GTPase activating protein | Virulence | SPI-1 | DNA | 0.0 | 99.9 |
| sptP | YP_217797.1 | protein tyrosine phosphate | Not tested | SPI-1 | DNA | 0.0 | 99.4 |
| stpA | NP_457272.1 | tyrosine phosphatase (associated with virulence) | Virulence | SPI-1 | DNA | 0.0 | 96.6 |
| stpA | NP_806481.1 | tyrosine phosphatase | Virulence | SPI-1 | DNA | 0.0 | 96.6 |
