Name : SeHA_C0025 (SeHA_C0025) Accession : YP_002043993.2 Strain : Salmonella enterica SL476 Genome accession: NC_011083 Putative virulence/resistance : Virulence Product : chaperone protein FimC Function : - COG functional category : - COG ID : - EC number : - Position : 26312 - 26998 bp Length : 687 bp Strand : + Note : identified by match to protein family HMM PF00345; match to protein family HMM PF02753 DNA sequence : ATGAAAAAAAACTTACCGATTTTCCTTCGATTATTGCTACTGCTGTCGGCGGCCGGCCTGTCGTTTGCCGCGCAGGCGGG AGGCATTGCGCTGGGCGCGACCAGGGTGATTTATCCGCAGGGAAGTAAGCAAACCTCCTTGCCGATTATTAATTCTTCTG CCAGCAATGTTTTTTTAATTCAGTCATGGGTCGCCAATGCCGATGGTTCACGCTCGACGGATTTTATCATTACGCCGCCT CTCTTTGTGATCCAGCCTAAAAAAGAAAATATATTACGTATTATGTATGTCGGGCCGTCATTACCGACCGATCGCGAAAG CGTATTTTATTTAAACAGTAAAGCGATACCCTCTGTCGATAAAAATAAATTGACCGGCAACTCCCTGCAAATTGCGACGC AAAGCGTGATTAAGCTATTTATCCGCCCGAAAAATCTGGCGGAGGCGCCAGCTCATGCCCCGTCGACGCTTCGCTGCCGT AACGAGCGCGGCCAGCTAACGATTACTAACCCTTCGCCGTACTACGTTTCGATGGTTGAACTGTACAGCGCGGGGAAAAA ACTGCCGAATACTATGGTACCGCCGAAAGGCGCGATCACTCTCCCGGCGACGCCCGGCCAGGTATCTTTGCGCACGGTAA ACGATTTTGGCGCAACGACGCCAGCACGCGTTTGTCCAGCTTCATGA Protein sequence : MKKNLPIFLRLLLLLSAAGLSFAAQAGGIALGATRVIYPQGSKQTSLPIINSSASNVFLIQSWVANADGSRSTDFIITPP LFVIQPKKENILRIMYVGPSLPTDRESVFYLNSKAIPSVDKNKLTGNSLQIATQSVIKLFIRPKNLAEAPAHAPSTLRCR NERGQLTITNPSPYYVSMVELYSAGKKLPNTMVPPKGAITLPATPGQVSLRTVNDFGATTPARVCPAS |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
fim2C | AFH78430.1 | putative fimbrial chaperone protein | Virulence | KpGI-5 | Protein | 9e-45 | 51 |
sfaE | CAC16952.2 | SfaE protein | Virulence | PAI III 536 | Protein | 3e-42 | 49 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
SeHA_C0025 | YP_002043993.2 | chaperone protein FimC | VFG0875 | Protein | 5e-46 | 52 |
SeHA_C0025 | YP_002043993.2 | chaperone protein FimC | VFG0445 | Protein | 5e-48 | 51 |
SeHA_C0025 | YP_002043993.2 | chaperone protein FimC | VFG0911 | Protein | 2e-42 | 49 |
SeHA_C0025 | YP_002043993.2 | chaperone protein FimC | VFG1644 | Protein | 2e-42 | 49 |
SeHA_C0025 | YP_002043993.2 | chaperone protein FimC | VFG0455 | Protein | 6e-35 | 42 |