Gene Information

Name : SeHA_C2395 (SeHA_C2395)
Accession : YP_002046214.1
Strain : Salmonella enterica SL476
Genome accession: NC_011083
Putative virulence/resistance : Virulence
Product : merR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0789
EC number : -
Position : 2303956 - 2304687 bp
Length : 732 bp
Strand : +
Note : identified by match to protein family HMM PF00376

DNA sequence : 
ATGGCGCTTTACACAATTGGTGAAGTGGCTTTGCTTTGTGATATCAATCCTGTCACGTTGCGCGCGTGGCAGAGACGTTA
TGGACTTTTAAAACCACAGCGAACGGATGGCGGTCATCGTCTGTTTAACGATGCCGATATCGACAGAATCCGCGAAATCA
AGCGCTGGATAGATAACGGCGTCCAGGTCAGCAAAGTCAAAGTGCTGCTCAGTAGCGACAGTAGCGAACAACCTAACGGC
TGGCGCGAACAGCAGGAGATCCTGCTGCACTACCTGCAAAGCAGTAATCTGCACAGTTTACGGTTATGGGTCAAAGAACG
CGGTCAGGATTATCCTGCCCAAACATTGACCACTAACCTGTTCGTCCCACTGCGGCGACGATTACAGTGCCAACAACCCG
CCCTTCAGGCGCTGCTCGGCATTCTTGACGGTATCCTGATCAACTATATTGCGCTCTGCCTGGCGTCTGCGCGTAAGAAA
CAGGGAAAAGATGCGTTGGTGATCGGCTGGAATATCCATGATACCACCCGCCTGTGGCTGGAAGGTTGGGTCGCCAGCCA
ACAGGGATGGCGAATCGACGTGTTGGCGCATTCGCTTAGCCAGTTCCGCCCGGAACTTTTTGACGGCAAGACGTTACTGG
TATGGTGCGGAGAAAACCAGACGCTGGCGCAGCAGCAGCAACTCCTGGCATGGCGCGCCCAGGGACACGACATTCATCCC
CTTGGCGTTTAA

Protein sequence : 
MALYTIGEVALLCDINPVTLRAWQRRYGLLKPQRTDGGHRLFNDADIDRIREIKRWIDNGVQVSKVKVLLSSDSSEQPNG
WREQQEILLHYLQSSNLHSLRLWVKERGQDYPAQTLTTNLFVPLRRRLQCQQPALQALLGILDGILINYIALCLASARKK
QGKDALVIGWNIHDTTRLWLEGWVASQQGWRIDVLAHSLSQFRPELFDGKTLLVWCGENQTLAQQQQLLAWRAQGHDIHP
LGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF 242 CAB37409.1 - Not tested SPI-2 Protein 4e-34 45
orf242 NP_460355.1 regulatory protein Not tested SPI-2 Protein 5e-34 45
STY1730 NP_456138.1 putative transcriptional regulator Not tested SPI-2 Protein 3e-34 44
t1258 NP_805061.1 transcriptional regulator Not tested SPI-2 Protein 3e-34 44
SC1411 YP_216398.1 MerR family transcriptional regulator Not tested SPI-2 Protein 8e-34 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SeHA_C2395 YP_002046214.1 merR family transcriptional regulator VFG0491 Protein 2e-34 45