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Name : nifJ (SeHA_C1831) Accession : YP_002045691.1 Strain : Salmonella enterica SL476 Genome accession: NC_011083 Putative virulence/resistance : Virulence Product : pyruvate:ferredoxin (flavodoxin) oxidoreductase Function : - COG functional category : C : Energy production and conversion COG ID : COG0674 EC number : 1.2.7.1 Position : 1790228 - 1793752 bp Length : 3525 bp Strand : + Note : identified by match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02176 DNA sequence : ATGCAAACAATTGACGGTAATGGCGCAGTAGCGTCGGTGGCGTTCCGTACCAGCGAGGTTATCGCCATTTACCCGATTAC GCCCAGTTCAACAATGGCTGAACAAGCGGATGCCTGGGCCGGCAATGGGCTTAAAAATGTCTGGGGCGATACGCCGCGTG TGGTAGAGATGCAGTCGGAAGGCGGCGCGATCGCCGCCGTTCACGGTGCGTTACAAACCGGTTCGCTTTCTACGTCATTT ACATCATCGCAGGGGCTGCTGCTGATGATTCCAACGCTGTATAAACTGGCGGGGCAGCTCACGCCGTTTGTACTGCACGT TGCCGCGCGCACTGTCGCCACACACGCGCTTTCTATTTTTGGCGACCATTCCGATGTGATGGCGGTCCGCCAGACAGGCT GCGCGATGTTATGCGCCGCCAGCGTTCAGGAAGCGCAGGATTTTGCGCTGATCGCGCACAGGGCTACGCTGAAAAGCCGC GTTCCGTTTATTCATTTTTTTGATGGCTTCCGTACATCGCATGAAATCAACAAAATTATACCGCTAACGGATGAAACCAT TCTGAACCTGATGCCGCAGGCGGAGATCGACGCTCACCGCGCCCGCGCGCTGAATCCGGAACATCCGGTGATTCGTGGAA CTTCAGCGAATCCGGATACCTACTTCCAGTCTCGCGAAGCGACCAACCCGTGGTACAACGCCGTTTATGATCATGTTGAA GAGGCGATGAAGGCATTTGGCGACGCTACGGGCCGTCAGTACCAGCCATTTGAATATTATGGCCATCCCCAGGCTGAACG CGTCATCATAATGATGGGCTCCGCCCTCGGCACCTGCGAAGAGGTCGTGGACGAGCTACTGATACGCGGAGAAAAGGTCG GCGTTCTGAAAGTCCGTCTGTTCCGCCCCTTCTCCGCCAAACATTTGTTACAGGCATTACCGGAAACCGTTCGCGCTATC GCCGTGCTGGATCGCACCAAAGAGCCTGGCGCGCAGGCCGAGCCGCTTTATCTGGACGTGATGACCGCACTGGCGGAAGC CTTTAATAATGGCGAGCGCGAAACGTTGCCGCGCACCATTGGCGGCCGTTATGGGCTATCATCCAAAGAGTTCGGCCCGG CGTGCGTACTGGCGGTCTTTAATGAACTCAGCCGCGCGAAACCCAAACCACGGTTTACGGTGGGCATTTATGATGACGTT ACTAACCTCTCGCTGCCATTACCGGAAAATACCCTGCCCGGCAGCGCTAAACTTGAAGCGTTATTTTACGGCCTGGGAAG CGACGGCAGCGTATCCGCCACGAAAAATAATATTAAAATTATCGGTAATTCTACGCCGTGGTATGCGCAAGGTTATTTCG TTTATGACTCTAAAAAAGCTGGCGGGCTCACGGTATCGCACCTGCGCGTCAGCGAAAAACCCATTCGTTCCGCTTACTTA ATTGCTCAGGCGGATTTTGTCGGCTGCCATCAATTACAGTTTATCGATAAATATCAGATGGCGGAGCGTCTAAAGCCCGG CGGTATCTTTCTGCTTAATACGCCGTACAGCGCCGACGAGGTCTGGTCGCGTCTGCCGCAAGAAGTTCAGGCGGTGTTGA ATCAGAAAAAGGCGCGTTTTTACGTGGTTAACGCGGCGAAAATCGCCCGCGAATGTGGACTTGGCGCCCGCATCAATACC GTCATGCAAATGGCTTTCTTCCACCTGACGCATATTCTTCCGGGCGATAGCGCCCTGGTTGAGCTGCAGGGCGCGATTGC CAAAAGCTATAGCAGCAAAGGTCAGGATCTGGTTGAGCGTAACTGGCAGGCATTGGCTCTGGCGCAGGAATCGCTGGCGG AAGTACCGTTGCAGGCGGTTAATCCGCACAGCGCGCATCGCCCGCCGGTCGTCTCCGACGCCGCGCCGGATTTCGTGAAA ACCGTTACCGCCGCCATGTTGGCGGGCCTCGGCGACGCACTGCCTGTTTCCGCCCTGCCGCCGGACGGAACATGGCCAAT GGGCACCACCCGCTGGGAAAAACGCAATATCGCCGAAGAGATTCCTGTCTGGAAAGAGGAACTGTGTACACAATGTAATC ACTGCGTCGCTGCCTGCCCTCACTCGGCAATTCGTGCGAAAGTCGTTTCCCCGCAGGCGATGGAGAACGCGCCAGCCAGT CTGCATTCGCTGGACGTGAAGTCCCGCGATATGCGCGGCCAGAAATATGTGCTGCAGGTCGCGCCGGAAGACTGTACTGG CTGTAATTTATGCGTAGAGGTCTGCCCGGCTAAAGATCGGCAAAATCCACAGATCAAGGCGATTAACATGATGTCGCGCC TTGAGCATGTGGAAGAAGAGAAAGTGAATTATGACTTCTTCCTCGACTTACCGGAAATCGATCGCAGCAAACTGGAACGA ATTGATATCCGCACATCGCAGCTTATTACGCCGCTGTTTGAATATTCCGGTGCCTGTTCCGGCTGCGGTGAAACGCCGTA TATTAAACTGCTGACTCAGTTATATGGCGACAGAATGTTAATCGCTAACGCCACGGGGTGTTCCTCTATTTACGGCGGTA ACTTACCCTCAACGCCTTATACCACCGATGCCAACGGACGCGGCCCGGCATGGGCGAATTCGTTATTTGAAGATAACGCG GAATTTGGTCTCGGTTTCCGTCTGAGCGTGGATCAGCACCGGGCGCGCGTCATGCGTTTACTGGCGCAATTCGCCGATCG CATCCCGGCGGAATTAAACGATGCGCTGCATGCCGAAGCAACGCCTGACGTTCGGCGTGAGCAGGTCGCCGCATTACGCC AACATCTGAAATCGGTTGCGGGCGCAGAGGAACTGTTAAAGGATGCTGATGCGCTGATAGAAAAATCAATCTGGCTGATT GGCGGCGATGGTTGGGCATACGACATCGGCTTTGGCGGTTTAGACCATGTGCTAAGCCTGACGGAGAATGTCAATATTCT GGTTCTGGATACGCAGTGTTACTCCAATACTGGCGGCCAGGCGTCGAAGGCGACGCCGCTTGGCGCCGTCACTAAATTTG GCGAACATGGCAAGCGTAAAGCCCGTAAAGATCTTGGCGTCAGCATGATGATGTATGGTCATGTTTATGTCGCGCAAATT TCGCTGGGCGCGCAGTTAAACCAGACGGTGAAAGCCATCCAGGAGGCCGAAGCCTGGCCAGGACCGTCGCTGATCATTGC CTATAGCCCCTGTGAGGAACATGGTTACGATCTGGCGTTAAGCCATGACCAGATGCGCCAGTTAACGGCGACCGGTTTCT GGCCGTTATACCGCTTTGATCCCCGCCGTGCGGATGAAGGCAAGCCGCCGCTGGCTCTGGACTCTCGGCCACCGTCTGAT GCCCTGGCGGAAACGTTGCTTAATGAACAGCGTTTCCGTCGCCTGAATGCGCAACAGCCTGAAGTAGCTGAACAATTATG GCGAGATGCCGCATTGGATTTGCAAAAACGCTATGACTTTCTTGCCTTGCTGGCAGGAAAAGCGGAAAAACCCGGCGCAG ATTAA Protein sequence : MQTIDGNGAVASVAFRTSEVIAIYPITPSSTMAEQADAWAGNGLKNVWGDTPRVVEMQSEGGAIAAVHGALQTGSLSTSF TSSQGLLLMIPTLYKLAGQLTPFVLHVAARTVATHALSIFGDHSDVMAVRQTGCAMLCAASVQEAQDFALIAHRATLKSR VPFIHFFDGFRTSHEINKIIPLTDETILNLMPQAEIDAHRARALNPEHPVIRGTSANPDTYFQSREATNPWYNAVYDHVE EAMKAFGDATGRQYQPFEYYGHPQAERVIIMMGSALGTCEEVVDELLIRGEKVGVLKVRLFRPFSAKHLLQALPETVRAI AVLDRTKEPGAQAEPLYLDVMTALAEAFNNGERETLPRTIGGRYGLSSKEFGPACVLAVFNELSRAKPKPRFTVGIYDDV TNLSLPLPENTLPGSAKLEALFYGLGSDGSVSATKNNIKIIGNSTPWYAQGYFVYDSKKAGGLTVSHLRVSEKPIRSAYL IAQADFVGCHQLQFIDKYQMAERLKPGGIFLLNTPYSADEVWSRLPQEVQAVLNQKKARFYVVNAAKIARECGLGARINT VMQMAFFHLTHILPGDSALVELQGAIAKSYSSKGQDLVERNWQALALAQESLAEVPLQAVNPHSAHRPPVVSDAAPDFVK TVTAAMLAGLGDALPVSALPPDGTWPMGTTRWEKRNIAEEIPVWKEELCTQCNHCVAACPHSAIRAKVVSPQAMENAPAS LHSLDVKSRDMRGQKYVLQVAPEDCTGCNLCVEVCPAKDRQNPQIKAINMMSRLEHVEEEKVNYDFFLDLPEIDRSKLER IDIRTSQLITPLFEYSGACSGCGETPYIKLLTQLYGDRMLIANATGCSSIYGGNLPSTPYTTDANGRGPAWANSLFEDNA EFGLGFRLSVDQHRARVMRLLAQFADRIPAELNDALHAEATPDVRREQVAALRQHLKSVAGAEELLKDADALIEKSIWLI GGDGWAYDIGFGGLDHVLSLTENVNILVLDTQCYSNTGGQASKATPLGAVTKFGEHGKRKARKDLGVSMMMYGHVYVAQI SLGAQLNQTVKAIQEAEAWPGPSLIIAYSPCEEHGYDLALSHDQMRQLTATGFWPLYRFDPRRADEGKPPLALDSRPPSD ALAETLLNEQRFRRLNAQQPEVAEQLWRDAALDLQKRYDFLALLAGKAEKPGAD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AFJ97267.1 | pyruvate ferredoxin | Virulence | Not named | Protein | 0.0 | 47 |
