Gene Information

Name : SeHA_C1579 (SeHA_C1579)
Accession : YP_002045447.1
Strain : Salmonella enterica SL476
Genome accession: NC_011083
Putative virulence/resistance : Resistance
Product : transposon Tn3 resolvase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1961
EC number : -
Position : 1525220 - 1525777 bp
Length : 558 bp
Strand : +
Note : identified by match to protein family HMM PF00239; match to protein family HMM PF02796

DNA sequence : 
ATGCGACTTTTTGGTTACGCTCGGGTCTCAACCAGTCAGCAGTCTCTTGATCTTCAGGTCAGAGCACTCAAAGACGCAGG
TGTGAAAGCAAACCGTATATTTACCGATAAGGCATCCGGCAGTTCAACAGACCGGGAAGGGCTGGATTTGCTGAGGATGA
AGGTGGAGGAAGGTGATGTCATTCTGGTTAAGAAGCTCGACCGTCTTGGCCGCGACACTGCCGATATGATCCAACTGATA
AAGGAATTTGACGCTCAGGGCGTGGCAGTCCGGTTCATTGATGACGGGATCAGTACCGACGGTGATATGGGGCAAATGGT
GGTCACCATCCTGTCGGCTGTGGCACAGGCTGAACGCCGGAGGATCCTAGAACGCACGAATGAGGGCCGACAGGAAGCAA
AGCTGAAAGGAATCAAATTTGGCCGCAGGCGTACCGTGGACAGGAACGTCGTGCTGACGCTTCATCAGAAGGGCACTGGT
GCAACGGAAATTGCTCATCAGCTCAGTATTGCCCGCTCCACGGTTTATAAAATTCTTGAAGACGAAAGGGCCTCGTGA

Protein sequence : 
MRLFGYARVSTSQQSLDLQVRALKDAGVKANRIFTDKASGSSTDREGLDLLRMKVEEGDVILVKKLDRLGRDTADMIQLI
KEFDAQGVAVRFIDDGISTDGDMGQMVVTILSAVAQAERRRILERTNEGRQEAKLKGIKFGRRRTVDRNVVLTLHQKGTG
ATEIAHQLSIARSTVYKILEDERAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpR ACK44544.1 Tn2 resolvase Not tested SGI1 Protein 2e-81 100
tnpR AGK07036.1 Tn2 resolvase Not tested SGI1 Protein 2e-81 100
tnpR AGK07094.1 Tn2 resolvase Not tested SGI1 Protein 2e-81 100
tnpR ACF06167.1 resolvase Not tested Tn5036-like Protein 6e-81 100
tpnR ADZ05795.1 resolvase Not tested AbaR17 Protein 2e-72 99
ABTW07_3873 YP_005797121.1 transposon Tn3 resolvase Not tested AbaR4e Protein 6e-74 97

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SeHA_C1579 YP_002045447.1 transposon Tn3 resolvase GU371926.1.gene95.p0 Protein 4e-81 100