|
Name : strB (SeHA_C1571) Accession : YP_002045439.1 Strain : Salmonella enterica SL476 Genome accession: NC_011083 Putative virulence/resistance : Resistance Product : aminoglycoside resistance protein B Function : - COG functional category : V : Defense mechanisms COG ID : COG3570 EC number : - Position : 1520349 - 1521194 bp Length : 846 bp Strand : + Note : identified by match to protein family HMM PF04655 DNA sequence : TTGGGGTTGATGTTCATGCCGCCTGTTTTTCCTGCTCATTGGCACGTTTCGCAACCTGTTCTCATTGCGGACACCTTTTC CAGCCTCGTTTGGAAAGTTTCATTGCCAGACGGGACTCCTGCAATCGTCAAGGGATTGAAACCTATAGAAGACATTGCTG ATGAACTGCGCGGGGCCGACTATCTGGTATGGCGCAATGGGAGGGGAGCAGTCCGGTTGCTCGGTCGTGAGAACAATCTG ATGTTGCTCGAATATGCCGGGGAGCGAATGCTCTCTCACATCGTTGCCGAGCACGGCGACTACCAGGCGACCGAAATTGC AGCGGAACTAATGGCGAAGCTGTATGCCGCATCTGAGGAACCCCTGCCTTCTGCCCTTCTCCCGATCCGGGATCGCTTTG CAGCTTTGTTTCAGCGGGCGCGCGATGATCAAAACGCAGGTTGTCAAACTGACTACGTCCACGCGGCGATTATAGCCGAT CAAATGATGAGCAATGCCTCGGAACTGCGTGGGCTACATGGCGATCTGCATCATGAAAACATCATGTTCTCCAGTCGCGG CTGGCTGGTGATAGATCCCGTCGGTCTGGTCGGTGAAGTGGGCTTTGGCGCCGCCAATATGTTCTACGATCCGGCTGACA GAGACGACCTTTGTCTCGATCCTAGACGCATTGCACAGATGGCGGACGCATTCTCTCGTGCGCTGGACGTCGATCCGCGT CGCCTGCTCGACCAGGCGTACGCTTATGGGTGCCTTTCCGCAGCTTGGAACGCGGATGGAGAAGAGGAGCAACGCGATCT AGCTATCGCGGCCGCGATCAAGCAGGTGCGACAGACGTCATACTAG Protein sequence : MGLMFMPPVFPAHWHVSQPVLIADTFSSLVWKVSLPDGTPAIVKGLKPIEDIADELRGADYLVWRNGRGAVRLLGRENNL MLLEYAGERMLSHIVAEHGDYQATEIAAELMAKLYAASEEPLPSALLPIRDRFAALFQRARDDQNAGCQTDYVHAAIIAD QMMSNASELRGLHGDLHHENIMFSSRGWLVIDPVGLVGEVGFGAANMFYDPADRDDLCLDPRRIAQMADAFSRALDVDPR RLLDQAYAYGCLSAAWNADGEEEQRDLAIAAAIKQVRQTSY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| strB | AGK07030.1 | StrB streptomycin phosphotransferase | Not tested | SGI1 | Protein | 2e-128 | 100 |
| ABK1_0257 | YP_005512829.1 | Streptomycin resistance protein B | Not tested | AbaR4d | Protein | 2e-128 | 100 |
| strB | AGK07088.1 | StrB streptomycin phosphotransferase | Not tested | SGI1 | Protein | 2e-128 | 100 |
| ABZJ_00265 | YP_005524221.1 | streptomycin 3''-kinase | Not tested | AbaR22 | Protein | 2e-128 | 100 |
| strB | AFV47971.1 | streptomycin (6) phosphotransferase StrB | Not tested | AbaR25 | Protein | 2e-128 | 100 |
| strB | YP_005176179.1 | aminoglycoside 6-phosphotransferase protein | Not tested | ICEPmu1 | Protein | 2e-128 | 100 |
| strB | AFV47999.1 | streptomycin (6) phosphotransferase StrB | Not tested | delta-AbaR25 | Protein | 2e-128 | 100 |
| strB | AEQ20908.1 | StrB, APH(6)-Id streptomycin(6) phosphtransferase | Not tested | Tn6166 | Protein | 2e-128 | 100 |
| strB | AFH57206.1 | streptomycin resistance protein | Not tested | AbaR4a | Protein | 4e-130 | 100 |
| strB | AEZ06048.1 | StrB, APH(6)-Id, streptomycin(6) phosphotransferase | Not tested | Tn6167 | Protein | 2e-128 | 100 |
| strB | AEA34676.1 | aminoglycoside resistance protein B | Not tested | Not named | Protein | 4e-127 | 100 |
| BJAB07104_00281 | YP_008207746.1 | Streptomycin 6-kinase | Not tested | AbaR25 | Protein | 6e-127 | 100 |
| BJAB0868_00285 | YP_008211611.1 | Streptomycin 6-kinase | Not tested | AbaR26 | Protein | 6e-127 | 100 |
| strB | ACK44538.1 | StrB | Not tested | SGI1 | Protein | 2e-128 | 100 |
| strB | YP_001800933.1 | aminoglycoside-6-phosphotransferase | Not tested | Not named | Protein | 6e-127 | 100 |
| strB | CAJ77026.1 | Streptomycin phosphotransferase B | Not tested | AbaR1 | Protein | 1e-127 | 99 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| strB | YP_002045439.1 | aminoglycoside resistance protein B | DQ464881.1.gene5.p01 | Protein | 1e-128 | 100 |
| strB | YP_002045439.1 | aminoglycoside resistance protein B | AF024602.1.gene6.p01 | Protein | 1e-128 | 99 |
| strB | YP_002045439.1 | aminoglycoside resistance protein B | NC_010410.6003392.p0 | Protein | 3e-126 | 99 |
| strB | YP_002045439.1 | aminoglycoside resistance protein B | AJ313522.gene.p01 | Protein | 1e-112 | 91 |
