|
Name : strA (SeHA_C1570) Accession : YP_002045438.1 Strain : Salmonella enterica SL476 Genome accession: NC_011083 Putative virulence/resistance : Resistance Product : aminoglycoside resistance protein A Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG3231 EC number : - Position : 1519450 - 1520358 bp Length : 909 bp Strand : + Note : identified by match to protein family HMM PF01636 DNA sequence : ATGAGAGATAGACCGGAACACAACCGGTGCAAGTCCATAGCAACTCGTTTCTTTTCGCAGGTTGAGCCACCTCCGCGCTT CATCAGAAAACTGAAGGAACCTCCATTGAATCGAACTAATATTTTTTTTGGTGAATCGCATTCTGACTGGTTGCCTGTCA GAGGCGGAGAATCTGGTGATTTTGTTTTTCGACGTGGTGACGGGCATGCCTTCGCGAAAATCGCACCTGCTTCCCGCCGC GGTGAGCTCGCTGGAGAGCGTGACCGCCTCATTTGGCTCAAAGGTCGAGGTGTGGCTTGCCCCGAGGTGATCAACTGGCA GGAGGAACAGGAGGGTGCATGCTTGGTGATAACGGCAATTCCGGGAGTACCGGCGGCTGATCTGTCTGGAGCGGATTTGC TCAAAGCGTGGCCGTCAATGGGGCAGCAACTTGGCGCTGTTCACAGCCTATCGGTTGATCAATGTCCGTTTGAGCGCAGG CTGTCGCGAATGTTCGGACGCGCCGTTGATGTGGTGTCCCGCAATGCCGTCAATCCCGACTTCTTACCGGACGAGGACAA GAGTACGCCGCAGCTCGATCTTTTGGCTCGTGTCGAACGAGAGCTACCGGTGCGGCTCGACCAAGAGCGCACCGATATGG TTGTTTGCCATGGTGATCCCTGCATGCCGAACTTCATGGTGGACCCTAAAACTCTTCAATGCACGGGTCTGATCGACCTT GGGCGGCTCGGAACAGCAGATCGCTATGCCGATTTGGCACTCATGATTGCTAACGCCGAAGAGAACTGGGCAGCGCCAGA TGAAGCAGAGCGCGCCTTCGCTGTCCTATTCAATGTATTGGGGATCGAAGCCCCCGACCGCGAACGCCTTGCCTTCTATC TGCGATTGGACCCTCTGACTTGGGGTTGA Protein sequence : MRDRPEHNRCKSIATRFFSQVEPPPRFIRKLKEPPLNRTNIFFGESHSDWLPVRGGESGDFVFRRGDGHAFAKIAPASRR GELAGERDRLIWLKGRGVACPEVINWQEEQEGACLVITAIPGVPAADLSGADLLKAWPSMGQQLGAVHSLSVDQCPFERR LSRMFGRAVDVVSRNAVNPDFLPDEDKSTPQLDLLARVERELPVRLDQERTDMVVCHGDPCMPNFMVDPKTLQCTGLIDL GRLGTADRYADLALMIANAEENWAAPDEAERAFAVLFNVLGIEAPDRERLAFYLRLDPLTWG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| strA | AFV47972.1 | streptomycin (3') phosphotransferase StrA | Not tested | AbaR25 | Protein | 9e-122 | 99 |
| strA | AFV48000.1 | streptomycin (3') phosphotransferase StrA | Not tested | delta-AbaR25 | Protein | 9e-122 | 99 |
| strA | YP_005176180.1 | aminoglycoside 3''-phosphotransferase protein | Not tested | ICEPmu1 | Protein | 2e-114 | 99 |
| strA | ACK44539.1 | StrA | Not tested | SGI1 | Protein | 9e-122 | 99 |
| strA | YP_001800932.1 | aminoglycoside-3''-phosphotransferase | Not tested | Not named | Protein | 1e-121 | 99 |
| strA | AEA34675.1 | aminoglycoside phosphotransferase | Not tested | Not named | Protein | 9e-122 | 99 |
| strA | AEQ20909.1 | StrA, APH(3')-Ib streptomycin(3') phosphotransferase | Not tested | Tn6166 | Protein | 1e-121 | 99 |
| strA | AFH57207.1 | streptomycin resistance protein | Not tested | AbaR4a | Protein | 9e-122 | 99 |
| strA | AEZ06049.1 | StrA, APH(3')-Ib, streptomycin(3') phosphotransferase | Not tested | Tn6167 | Protein | 1e-121 | 99 |
| strA | AGK07031.1 | StrA streptomycin phosphotransferase | Not tested | SGI1 | Protein | 9e-122 | 99 |
| strA | AGK07089.1 | StrA streptomycin phosphotransferase | Not tested | SGI1 | Protein | 9e-122 | 99 |
| strA | CAJ77025.1 | Streptomycin phosphotransferase A | Not tested | AbaR1 | Protein | 3e-123 | 99 |
| BJAB07104_00282 | YP_008207747.1 | Aminoglycoside phosphotransferase | Not tested | AbaR25 | Protein | 7e-124 | 99 |
| ABZJ_00266 | YP_005524222.1 | hypothetical protein | Not tested | AbaR22 | Protein | 7e-124 | 99 |
| BJAB0868_00286 | YP_008211612.1 | Aminoglycoside phosphotransferase | Not tested | AbaR26 | Protein | 3e-123 | 99 |
| ABK1_0266 | YP_005512838.1 | StrA | Not tested | AbaR4d | Protein | 7e-124 | 99 |
| ABK1_0258 | YP_005512830.1 | StrA | Not tested | AbaR4d | Protein | 4e-131 | 99 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| strA | YP_002045438.1 | aminoglycoside resistance protein A | AF024602.1.gene5.p01 | Protein | 6e-122 | 99 |
| strA | YP_002045438.1 | aminoglycoside resistance protein A | DQ336355.1.orf1.gene | Protein | 4e-49 | 49 |
