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Name : SeHA_C1542 (SeHA_C1542) Accession : YP_002045412.1 Strain : Salmonella enterica SL476 Genome accession: NC_011083 Putative virulence/resistance : Virulence Product : type III secretion apparatus lipoprotein, YscJ/HrcJ family Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4669 EC number : - Position : 1495792 - 1496541 bp Length : 750 bp Strand : + Note : identified by match to protein family HMM PF01514; match to protein family HMM TIGR02544 DNA sequence : ATGAAGGTTCATCGTATAGTATTTCTTACTGTCCTTACGTTCTTTCTTACGGCATGTGATGTGGATCTTTATCGCTCATT GCCAGAGGATGAGGCGAATCAAATGCTGGCATTACTTATGCAGCATCATATTGATGCGGAAAAAAAACAGGAAGAGGACG GTGTTACCTTACGTGTCGAGCAGTCGCAGTTTATTAATGCGGTTGAGCTACTTAGACTTAACGGTTATCCGCATCGTCAG TTTACAACGGCGGATAAGATGTTTCCGGCTAATCAGTTAGTGGTATCACCCCAGGAAGAACAGCAGAAGATTAATTTTTT AAAAGAACAAAGAATTGAAGGAATGCTGAGTCAGATGGAGGGCGTGATTAATGCAAAAGTGACCATTGCGCTACCGACTT ATGATGAGGGAAGTAACGCTTCTCCGAGCTCAGTTGCCGTATTTATAAAATATTCACCTCAGGTCAATATGGAGGCCTTT CGGGTAAAAATTAAAGATTTAATAGAGATGTCAATCCCTGGGTTGCAATACAGTAAGATTAGTATCTTGATGCAGCCTGC TGAATTCAGAATGGTACCTGATGTACCCGCGAGACAAACATTCTGGATTATGGACGTGATCAACGCCAATAAAGGGAAGG TGGAGAAGTGGTTGATGAAATACCCTTATCAGTTGATGTTATCGTTGACAGGACTGTTATTAGGAGTGGGCATCCTGATC GGCTATTTTTGCCTGAGACGCCGTTTTTGA Protein sequence : MKVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVEQSQFINAVELLRLNGYPHRQ FTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQMEGVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAF RVKIKDLIEMSIPGLQYSKISILMQPAEFRMVPDVPARQTFWIMDVINANKGKVEKWLMKYPYQLMLSLTGLLLGVGILI GYFCLRRRF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ssaJ | CAA12196.1 | SsaJ | Virulence | SPI-2 | Protein | 5e-86 | 100 |
| ssaJ | YP_216417.1 | secretion system apparatus protein SsaJ | Virulence | SPI-2 | Protein | 2e-106 | 100 |
| ssaJ | CAA70532.1 | secretion system apparatus | Virulence | SPI-2 | Protein | 4e-105 | 99 |
| ssaJ | NP_460374.1 | needle complex inner membrane lipoprotein | Virulence | SPI-2 | Protein | 6e-105 | 99 |
| ssaJ | NP_456119.1 | putative pathogenicity island lipoprotein | Virulence | SPI-2 | Protein | 9e-106 | 99 |
| ssaJ | NP_805080.1 | pathogenicity island lipoprotein | Virulence | SPI-2 | Protein | 9e-106 | 99 |
| YPO0263 | YP_002345344.1 | type III secretion system apparatus lipoprotein | Virulence | Not named | Protein | 8e-50 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SeHA_C1542 | YP_002045412.1 | type III secretion apparatus lipoprotein, YscJ/HrcJ family | VFG0510 | Protein | 2e-105 | 99 |
