Gene Information

Name : SeHA_C1541 (SeHA_C1541)
Accession : YP_002045411.1
Strain : Salmonella enterica SL476
Genome accession: NC_011083
Putative virulence/resistance : Virulence
Product : type III secretion system apparatus protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1495532 - 1495795 bp
Length : 264 bp
Strand : +
Note : identified by match to protein family HMM PF09525; match to protein family HMM TIGR02497

DNA sequence : 
TTGAATATTTCTGATATGAGCGTAGTGCCTGTAAGCACTCAATCTTATGTAAAGTCCTCTGCAGAACCGAGCCAGGAGCA
AATTAATTTTTTTGAACAATTGCTGAAAGATGAAGCATCCACCAGTAACTCCAGTGCTTTATTACCGCAGGTTATGTTGA
CCAGACAAATGGATTATATGCAGTTAACGGTAGGCGTCGATTATCTTGCCAGAATATCAGGCGCAGCATCGCAAGCGCTT
AATAAGCTGGATAACATGGCATGA

Protein sequence : 
MNISDMSVVPVSTQSYVKSSAEPSQEQINFFEQLLKDEASTSNSSALLPQVMLTRQMDYMQLTVGVDYLARISGAASQAL
NKLDNMA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssaI NP_460373.1 type III secretion system apparatus protein Virulence SPI-2 Protein 8e-32 99
ssaI CAA12195.1 SsaI Virulence SPI-2 Protein 5e-32 99
ssaI AAX49622.1 SsaI Virulence SPI-2 Protein 5e-32 99
ssaI YP_216416.1 secretion system apparatus protein SsaI Virulence SPI-2 Protein 5e-31 98
ssaI NP_805079.1 pathogenicity island protein Virulence SPI-2 Protein 3e-30 93
ssaI NP_456120.1 putative pathogenicity island protein Virulence SPI-2 Protein 3e-30 93

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SeHA_C1541 YP_002045411.1 type III secretion system apparatus protein VFG0509 Protein 2e-32 99