Gene Information

Name : SeHA_C1534 (SeHA_C1534)
Accession : YP_002045404.1
Strain : Salmonella enterica SL476
Genome accession: NC_011083
Putative virulence/resistance : Virulence
Product : translocation machinery component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1492066 - 1492569 bp
Length : 504 bp
Strand : +
Note : -

DNA sequence : 
ATGGGTACTGAATCAATGCTTCTGTTATTTGATGATATCTGGATGAAGCTAATGGAGCTTGCCAAAAAGCTGCGCGATAT
CATGCGCAGCTATAACGTAGAAAAACAACGACTGTCCTGGGAACTGCAAGTCAATGTTTTGCAGACGCAAATGAAAACAA
TTGATCAAGCGTTTAAAGCATCAATGATTACTGCGGGTGGCGCCATGTTGTCGGGAGTGCTGACGATAGGATTAGGGGCT
GTAGGCGGGGAAACCGGTCTTATAGCGGGTCAAGCCGTAGGACACACCGCTGGGGGAGTCATGGGCCTGGGGGCCGGTGT
AGCGCAACGTCAAAGTGATCAAGATAAAGCGATTGCCGACCTGCAACAAAATGGGGCCCAATCTTATAATAAATCCCTGA
CGGACATTATGGAGAAAGCAACTGAAATTATGCAGCAAATCATCGGCGTGGGGTCGTCACTGGTCACGGTTCTTGCTGAA
ATACTCCGGGCATTAACGAGGTAA

Protein sequence : 
MGTESMLLLFDDIWMKLMELAKKLRDIMRSYNVEKQRLSWELQVNVLQTQMKTIDQAFKASMITAGGAMLSGVLTIGLGA
VGGETGLIAGQAVGHTAGGVMGLGAGVAQRQSDQDKAIADLQQNGAQSYNKSLTDIMEKATEIMQQIIGVGSSLVTVLAE
ILRALTR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sseD NP_456127.1 putative pathogenicity island effector protein Virulence SPI-2 Protein 1e-63 99
sseD NP_805072.1 pathogenicity island effector protein Virulence SPI-2 Protein 1e-63 99
sseD NP_460366.1 translocation machinery component Virulence SPI-2 Protein 2e-63 98
sseD AAC28882.1 SseD Virulence SPI-2 Protein 1e-62 98
sseD CAA12188.1 SseD Virulence SPI-2 Protein 1e-63 98
sseD YP_216409.1 secretion system effector protein SseD Virulence SPI-2 Protein 2e-61 96

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SeHA_C1534 YP_002045404.1 translocation machinery component VFG0502 Protein 4e-64 98