Gene Information

Name : SeHA_C1530 (SeHA_C1530)
Accession : YP_002045400.1
Strain : Salmonella enterica SL476
Genome accession: NC_011083
Putative virulence/resistance : Virulence
Product : type III secretion system protein, YseE family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1488610 - 1488852 bp
Length : 243 bp
Strand : +
Note : identified by match to protein family HMM TIGR02501

DNA sequence : 
ATGACAACTCTGACCCGGTTAGAAGATTTGCTGCTTCATTCGCGTGAAGAGGCCAAAGGCATAATTTTACAATTAAGGGC
TGCCCGGAAACAGTTAGAAGAGAACAACGGTAAGTTAAAGGATCCGCAGCAATATCAGCAAAACACCTTATTGCTTGAAG
CGATCGAGCAGGCCGAAAATATCATCAACATTATTTATTATCGTTACCATAACAGCGCACTTGTAGTGAGTGAGCAAGAG
TAA

Protein sequence : 
MTTLTRLEDLLLHSREEAKGIILQLRAARKQLEENNGKLKDPQQYQQNTLLLEAIEQAENIINIIYYRYHNSALVVSEQE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssaE NP_460361.1 secretion system effector Virulence SPI-2 Protein 2e-19 99
ssaE AAC28877.1 putative secretory apparatus component Virulence SPI-2 Protein 1e-19 99
ssaE CAA12183.1 SsaE Virulence SPI-2 Protein 1e-19 99
ssaE NP_456132.1 putative secretion system protein Virulence SPI-2 Protein 3e-19 98
ssaE NP_805067.1 secretion system protein Virulence SPI-2 Protein 3e-19 98
ssaE YP_216404.1 secretion system effector protein SsaE Virulence SPI-2 Protein 5e-19 97

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SeHA_C1530 YP_002045400.1 type III secretion system protein, YseE family VFG0497 Protein 5e-20 99