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Name : SeHA_C1529 (SeHA_C1529) Accession : YP_002045399.1 Strain : Salmonella enterica SL476 Genome accession: NC_011083 Putative virulence/resistance : Virulence Product : type III secretion apparatus protein, YscD/HrpQ family Function : - COG functional category : - COG ID : - EC number : - Position : 1487403 - 1488602 bp Length : 1200 bp Strand : + Note : identified by match to protein family HMM TIGR02500 DNA sequence : ATGGTTAATCCAAAGAGTTCCTGGAAAATACGTTTTTTAGGTCACGTTTTACAAGGCCGGGAAGTATGGCTGAATGAAGG TAACCTGTCACTGGGGGAGAAGGGATGCGATATTTGTATTCCGCTGGCTATAAATGAAAAAATTATTCTGAGAGAACAGG CAGATAGTTTATTTGTTGATGCCGGGAAAGCCAGAGTTAGAGTTAATGGTCGCAGATTTAATCCAAATAAGCCGCTACCA TCCAGTGGGGTTTTGCAGGTTGCGGGAGTGGCTATCGCGTTTGGTAAACAGGATTGTGAACTTGCTGATTATCAAATACC CGTTTCCAGATCAGGGTACTGGTGGTTGGCTGGCGTATTCTTGATTTTCATCGGTGGAATGGGTGTCCTGTTAAGTATTA GTGGTCAGCCTGAAACGGTAAATGACTTACCTTTGCGGGTTAAGTTTTTATTAGACAAAAGCAATATTCATTATGTGCGG GCGCAATGGAAAGAAGATGGAAGCCTGCAGTTGTCCGGTTATTGCTCGTCAAGCGAACAGATGCAAAAGGTGAGAGCGAC TCTCGAATCATGGGGGGTCATGTATCGGGATGGTGTAATCTGTGATGACTTATTGATACGAGAGGTGCAGGATGTTTTGA TAAAAATGGGTTACCCGCATGCTGAAGTATCCAGCGAAGGGCCGGGGAGCGTGTTAATTCATGATGATATACAAATGGAT CAGCAATGGCGTAAGGTTCAACCATTACTTGCAGATATTCCCGGGTTATTGCACTGGCAGATTAGTCACTCTCATCAGTC TCAGGGGGATGATATTATTTCTGCGATAATAGAGAACGGTTTAGTGGGGCTTGTCAATGTTACGCCAATGCGGCGCTCTT TTGTTATCAGTGGTGTACTGGATGAATCTCATCAACGCATTTTGCAAGAAACGTTAGCAGCATTAAAGAAAAAGGACCCC GCTCTTTCTTTAATTTATCAGGATATTGCGCCTTCTCATGATGAAAGCAAGTATCTGCCCGCGCCAGTGGCTGGCTTTGT ACAGAGTCGCCATGGTAATTACTTATTACTGACGAATAAAGAGCGTTTACGTGTAGGGGCATTGTTACCCAATGGAGGAG AAATTGTCCATCTGAGTGCCGATGTGGTAACGATTAAACATCATGATACTTTGATTAACTATCCATTAGATTTTAAGTGA Protein sequence : MVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLAINEKIILREQADSLFVDAGKARVRVNGRRFNPNKPLP SSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWLAGVFLIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVR AQWKEDGSLQLSGYCSSSEQMQKVRATLESWGVMYRDGVICDDLLIREVQDVLIKMGYPHAEVSSEGPGSVLIHDDIQMD QQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVISGVLDESHQRILQETLAALKKKDP ALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLLLTNKERLRVGALLPNGGEIVHLSADVVTIKHHDTLINYPLDFK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ssaD | NP_460360.1 | virulence protein | Virulence | SPI-2 | Protein | 0.0 | 99 |
| ssaD | YP_216403.1 | secretion system apparatus protein SsaD | Virulence | SPI-2 | Protein | 0.0 | 99 |
| ssaD | NP_456133.1 | putative pathogenicity island protein | Virulence | SPI-2 | Protein | 0.0 | 99 |
| ssaD | NP_805066.1 | pathogenicity island protein | Virulence | SPI-2 | Protein | 0.0 | 99 |
| spiB | AAC44302.1 | SpiB | Virulence | SPI-2 | Protein | 1e-149 | 99 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SeHA_C1529 | YP_002045399.1 | type III secretion apparatus protein, YscD/HrpQ family | VFG0496 | Protein | 0.0 | 99 |
