Gene Information

Name : SeHA_C1525 (SeHA_C1525)
Accession : YP_002045395.1
Strain : Salmonella enterica SL476
Genome accession: NC_011083
Putative virulence/resistance : Virulence
Product : merR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0789
EC number : -
Position : 1480775 - 1481503 bp
Length : 729 bp
Strand : -
Note : identified by match to protein family HMM PF00376

DNA sequence : 
ATGTCGTATTCTATAGGCGAATTTGCCAGACTATGCGGTATCAATGCCGCCACGCTAAGGGCATGGCAGCGACGCTATGG
TTTATTGAAACCGCAGCGTACTGATGGCGGGCATCGCTTATACAGCGATGACGATATTCGACAAGCGCTTAGCATCCTCG
ACTGGGTGAGAAAAGGCGTACCGATAAGCCAGGTCAAACCCTTACTGTCGCGTCCGGTCATTCGCCTGGGCGATAACTGG
ATAACGATCCAGGAGACGATGCTCCAACATCTCCACGAAGGGCGAATTGACGCGCTGCGGCAGTTGATTTATGACTGTGG
CCGGGAATATCCTCGCGCAGAACTGGTGACCCATTTATTGCGTCCGTTGCGCAGCAAAGTGTCCGCGCACCTTCCCGCCG
TGATGACGCTGCGCGAAATACTGGATGGCATCATTATTGCCTACACCTCTTTTTGCCTTGAAGGCGACAGAAAAGCGCCT
GGCAACAATGCCTTTATTAGCGGATGGCATCTCTCGGATCACTGTGAAATCTGGCTGGAAGCGTTGACTCGTACCGGACA
AGAGCTGCGGCTCAATGTGCTTCCCTCTCCCCCAGTCGTGCTGGCGCCCGAGCTGTTCGCCCAGAGAAAATGGTTCCTGG
TGACCACCGGAAAGCTCACTGCCGGGCAGAAAAAACAGCTTGCCCAGTGGCGCAACGTGGTCGCTTCGCTGGAGGTTATC
ACACTATAG

Protein sequence : 
MSYSIGEFARLCGINAATLRAWQRRYGLLKPQRTDGGHRLYSDDDIRQALSILDWVRKGVPISQVKPLLSRPVIRLGDNW
ITIQETMLQHLHEGRIDALRQLIYDCGREYPRAELVTHLLRPLRSKVSAHLPAVMTLREILDGIIIAYTSFCLEGDRKAP
GNNAFISGWHLSDHCEIWLEALTRTGQELRLNVLPSPPVVLAPELFAQRKWFLVTTGKLTAGQKKQLAQWRNVVASLEVI
TL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orf242 NP_460355.1 regulatory protein Not tested SPI-2 Protein 3e-111 99
STY1730 NP_456138.1 putative transcriptional regulator Not tested SPI-2 Protein 3e-111 99
t1258 NP_805061.1 transcriptional regulator Not tested SPI-2 Protein 3e-111 99
ORF 242 CAB37409.1 - Not tested SPI-2 Protein 3e-111 99
SC1411 YP_216398.1 MerR family transcriptional regulator Not tested SPI-2 Protein 2e-110 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SeHA_C1525 YP_002045395.1 merR family transcriptional regulator VFG0491 Protein 1e-111 99