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Name : SeHA_C1163 (SeHA_C1163) Accession : YP_002045056.1 Strain : Salmonella enterica SL476 Genome accession: NC_011083 Putative virulence/resistance : Virulence Product : guanine nucleotide exchange factor SopE Function : - COG functional category : - COG ID : - EC number : - Position : 1145344 - 1146066 bp Length : 723 bp Strand : - Note : identified by match to protein family HMM PF05364; match to protein family HMM PF07487 DNA sequence : GTGACAAAAATAACTTTATTTCCCCAGGATTTTAGAATCCAAAAACAGGAAACCACACTACTAAAAGAAAAATCAACCGA GAAAAATTCTTTAGCAAAAAGTATTCTCGCAGTAAAAAATCACTTCATTGAATTAAGGTCAAAATTATCTGAACGTTTTA TTTCGCATAAGAACACTGAGTCTTCTGCAACACACTTTCACCGAGGAAGCGCATCTGAGGGCCGGGCAGTGTTGACAAAT AAAGTCGTTAAAGATTTTATGCTTCAAACGCTCAATGATATAGATATTAGAGGTAGTGCGAGTAAAGACCCCGCATACGC CAGCCAGACCCGTGAAGCTATACTATCGGCAGTTTACAGCAAGAATAAAGATCAGTGTTGTAATTTGCTCATCAGCAAAG GGATCAACATAGCGCCTTTTCTTCAGGAAATTGGCGAAGCAGCGGAAAATGCAGGTCTGCCCGGAACAACCAAAAATGAC GTTTTTACGCCAAGCGGCGCAGGGGCCAATCCTTTTATAACTCCGTTGATTTCATCAGCAAACAGTAAGTATCCACGTAT GTTTATCAATCAACATCAGCAGGCATCCTTTAAAATCTATGCGGAGAAGATCATTATGACAGAAGTTGCACCACTGTTTA ATGAGTGTGCTATGCCGACTCCACAGCAATTCCAACTGATACTAGAAAACATTGCTAATAAATATATACAATACACTCCC TGA Protein sequence : MTKITLFPQDFRIQKQETTLLKEKSTEKNSLAKSILAVKNHFIELRSKLSERFISHKNTESSATHFHRGSASEGRAVLTN KVVKDFMLQTLNDIDIRGSASKDPAYASQTREAILSAVYSKNKDQCCNLLISKGINIAPFLQEIGEAAENAGLPGTTKND VFTPSGAGANPFITPLISSANSKYPRMFINQHQQASFKIYAEKIIMTEVAPLFNECAMPTPQQFQLILENIANKYIQYTP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| sopE | NP_458691.1 | invasion-associated secreted protein. | Virulence | SPI-7 | Protein | 2e-108 | 99 |
| sopE | NP_807899.1 | invasion-associated secreted protein | Virulence | SPI-7 | Protein | 2e-108 | 99 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SeHA_C1163 | YP_002045056.1 | guanine nucleotide exchange factor SopE | VFG0467 | Protein | 1e-81 | 70 |
