Gene Information

Name : SeHA_A0052 (SeHA_A0052)
Accession : YP_002043889.1
Strain :
Genome accession: NC_011081
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 28907 - 29140 bp
Length : 234 bp
Strand : +
Note : identified by match to protein family HMM PF06006

DNA sequence :
ATGAGCGAATATTTCAGAATACTTCAGGGACTGCCGGACGGCTCCTTTACCCGCGAACAGGCGGAAGCCGTTGCCGCACA
GTACCGGAACGTCTTTATCGAGGATGACCACGGAGAACATTTTCGCCTGGTTGTCCGTAATAACGGAACAATGGTCTGGC
GTACCTGGAATTTTGAGGACGGTGCCGGGTACTGGATGAACCATGCCATCCGTGATTTCGGGATTCTTAAGTAA

Protein sequence :
MSEYFRILQGLPDGSFTREQAEAVAAQYRNVFIEDDHGEHFRLVVRNNGTMVWRTWNFEDGAGYWMNHAIRDFGILK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ykfF CAE85198.1 YkfF protein Not tested PAI V 536 Protein 7e-12 55
unnamed CAD33784.1 hypothetical protein Not tested PAI I 536 Protein 6e-14 54
ORF_46 AAZ04455.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 6e-14 54
c5157 NP_757005.1 hypothetical protein Not tested PAI II CFT073 Protein 3e-13 53
unnamed CAI43842.1 hypothetical protein Not tested LEE Protein 4e-07 49
aec70 AAW51753.1 Aec70 Not tested AGI-3 Protein 4e-07 49
ykfF ADD91705.1 YkfF Not tested PAI-I AL862 Protein 4e-07 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SeHA_A0052 YP_002043889.1 hypothetical protein VFG1525 Protein 3e-14 54