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Name : SeHA_A0117 (SeHA_A0117) Accession : YP_002043952.1 Strain : Genome accession: NC_011081 Putative virulence/resistance : Virulence Product : type IVB pilus formation outer membrane protein, R64 PilN family Function : - COG functional category : N : Cell motility COG ID : COG1450 EC number : - Position : 83040 - 84722 bp Length : 1683 bp Strand : - Note : identified by match to protein family HMM PF00263; match to protein family HMM PF07655; match to protein family HMM TIGR02520 DNA sequence : ATGAAAAAATCACACCAGCGTTCAATGAAGCTGGCGGTGCTCCCCTGCATGATCGCCGTCGCTCTTTCCATCTCCGGATG TACTTTCAGCGAAATCAACAAAATGCAGAAAAAAGCACAGGAAGACTCAGCACATGCACGGGAAAAGGTATCAGCCCTTT CGGCCCGTAAATCGCAGGCTCTTACCTGGCTCGATAATCAATGGATAAACCCTGTTCCGGTCGCTCAGGTATCAAGAGAG AAAAAACAAACAGCTCCGGCCTGCTACATCACGCAGGCAAGAAAAGGAGAGATCACTCTGCAGGAACTGGGGCAACGTAT TACTGCCGTATGCGGCATCCCTGTGATCATCACGCCTGACGCAGCCAATTCAACTCTTGAAGGAGGCGCTACCCGCCAGA TGACAGGAACACTACCAGCACCAGATGAAAATGGGCGTCTACCGTTAAGCAGCCTGGGCAGCACAACAATGACTACCTCC ACTCAGCCATTAACGCTGAATAACCTCATGTGGCAGGGAGATATCAATGGTCTTCTGGATCTGATGGCCAGCCGGAGTGG TCTGTACTGGCGCATGGATAATGGTCGGATTGTATTCTATCTGACTGAAACCAGAACGTATCCACTTCATATGCTGAACA CCAAAACCAGCAGCAGTTCCAGTGTCAGCTCTGGCTCAACAAGCACAATGGGGGCAACAGGAGGCCAGGATAACTCAGCA TCCGGTGATGCAACGTCCTCTCAGAGCACAACCGTTGGTCAGGAATACGATCTGTATGAAGACATCCGGAAAACTATTGA AGCAATGCTGACACCAGAAAAAGGCCGTTACTGGTTATCTGCATCGAGCTCAACGCTGACTGTCACTGATACTCCAGCTG TCCAGGAAGCCGTCGCACGATATGTGGACGAACAAAACAGTATTATGAACCGCCAGGTAGCCCTGAACGTACAGGTTCTG AGCGTCAGCAATACCAGAAACGAACAGTTCGGTCTGGACTGGAACCTTGTTTATAAATCGCTACATTCCGCCGGAGCAAC GTTGAACAATGCAAGCGGAGATTTTACAGGCGCTACATCTGCAGGCGTATCAATTCTGGATACGGCAACAGGGAATGCCG CCAAATTCAGCGGTTCCAGTCTTCTGATTAAAGCGCTGAGTGAACAGGGCGATGTCAGTGTTGTGACTTCACAAGAAAGC ACTGTCACAAACCTGACGCCGGTACCTATCCAGATGGCAGATCAGACGGTTTACGTCGCCCAGTCAGCAACAACAACGAC TACGGATGTAGGAGCAACAACAACATTAACGCCGGGCATGATCACCACCGGATTCAATATGACCCTGCTGCCTTTAATTC AGAAAACGGGCAATCTCCAGTTGCAGATGAATTTTAATCTGTCAGATCCCCCAACAATCCGTAGCTTTACGTCAAAAGAC GGAAACAGTTACATCGAAATGCCGTATACCAAACTGCGTTCACTGAGCCAGAAGGTCAATCTGAAAGAAGGGCAATCACT TGTCGTTACTGGTTTCGATCAGAACAATACGACGACAAGTAAAGCCGGTACGTTTACGCCAGCAAATCCATTATTTGGTG GTTCACAAACCGGGAAAAATGAACGCAGCACGCTTGTAATCATCATTACCCCGACTTTCCCGTCAGGAGGCAACAATGGC TGA Protein sequence : MKKSHQRSMKLAVLPCMIAVALSISGCTFSEINKMQKKAQEDSAHAREKVSALSARKSQALTWLDNQWINPVPVAQVSRE KKQTAPACYITQARKGEITLQELGQRITAVCGIPVIITPDAANSTLEGGATRQMTGTLPAPDENGRLPLSSLGSTTMTTS TQPLTLNNLMWQGDINGLLDLMASRSGLYWRMDNGRIVFYLTETRTYPLHMLNTKTSSSSSVSSGSTSTMGATGGQDNSA SGDATSSQSTTVGQEYDLYEDIRKTIEAMLTPEKGRYWLSASSSTLTVTDTPAVQEAVARYVDEQNSIMNRQVALNVQVL SVSNTRNEQFGLDWNLVYKSLHSAGATLNNASGDFTGATSAGVSILDTATGNAAKFSGSSLLIKALSEQGDVSVVTSQES TVTNLTPVPIQMADQTVYVAQSATTTTTDVGATTTLTPGMITTGFNMTLLPLIQKTGNLQLQMNFNLSDPPTIRSFTSKD GNSYIEMPYTKLRSLSQKVNLKEGQSLVVTGFDQNNTTTSKAGTFTPANPLFGGSQTGKNERSTLVIIITPTFPSGGNNG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| YpsIP31758_3734 | YP_001402688.1 | type IVB pilus formation outer membrane protein | Virulence | YAPI | Protein | 2e-93 | 49 |
| pilN | CAF28487.1 | putative lipoprotein | Virulence | YAPI | Protein | 4e-93 | 49 |
| YE3504 | YP_001007666.1 | putative type IV pilus operon lipoprotein | Virulence | YAPI | Protein | 9e-105 | 49 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SeHA_A0117 | YP_002043952.1 | type IVB pilus formation outer membrane protein, R64 PilN family | VFG2310 | Protein | 4e-105 | 49 |
