|
Name : SeHA_A0114 (SeHA_A0114) Accession : YP_002043949.1 Strain : Genome accession: NC_011081 Putative virulence/resistance : Virulence Product : ATP-binding protein Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 79749 - 81302 bp Length : 1554 bp Strand : - Note : identified by match to protein family HMM PF00437 DNA sequence : ATGGATAAATATAATCTGAAGGATGCTCTCCTTTTTATATCCAGGGGAGACACCCATGAAATTCTTATAGAAACAAACCA GCGGACAAGGCCTGACGTACAAAGTAATCTCCAGGAGCTGCTAAAATTATATCCGGATATCAACCCAAAAGTAGTCTCGT TGTCGGAGTTACAGGAGGCAGGTCAGGATGAGAAAAACAGAGGCCCGAAAGAACGAATTATTCATCTGAAAGACCTTGCT GATGTCAGTGAAAGTGAGAAGAAAGTTCTATCTTATTTTGAAACTGCCAGAAAACTTGGTGCTTCAGATATTCATTTCTT AATTTCAGAGTCTATTTTCAAAGTTCGCATGAGAATATTCGGTGAACTGCAGACTGTAGATGAAGATCAACCAGCACTGG GCTATTCACTTTGCGCAACAGCCATTCTGTCAATGGCTGATGTCACTGAAACCAGTTTCTTCCCTCAAAGGGAGCAGGAT GCGCGCCTGTCCCCACAATTAATGCGAAAAATAGGAATATTTGGTGCACGCTACAGTCACAGACCTACGGGAGACGGTCT GATTGCAGTTATGCGCCTGATACCCGATGACGGAGATAAAGTTCCCACGTTTAAACAACTGGGCTTTATCCCGGAACAAA TCCGGTTGCTGAACATAATGCTGCGCCGCCCGGAAGGAAAAATAGTCCTGTCAGGTCCAACCGGTTCCGGTAAATCGACA ACGTTACGCAGCGCCTGCCGTGTATATCTTGACGATAATCAGGGGCGACACCTGCTAACAATCGAAGATCCGCTGGAAGG ACAGATACTGGGAGCAACACAGACTCCGATTATCTGCGACAAATCCGACGAAGATGCCGTCAAACTGGCATGGAGTCGGG CTATTTCATCGGCAATGCGACTTGACCCTGATGCCATCATGGAAGGGGAAATGCGCGATCTTATCTCGATGATGTCAACC ACCTACGCGGCACAGACCGGGCACATAGTTCTGACGACATTACATACAAACTCAGCTCTGGGTATACCGGAGCGAATGAT TACGATGGGTATGAATGCCGATCTTATTTGCGATGCGCAATTACTGATTGGGATGATCAGCCAGCGCCTTGTACCAACTC TGTGTCCCTCCTGCCGTATTCCATGGGAAAAGCGAGCACCTGAACTTAGCGACGACGAGCGTGATTACCTTGAGCGGCAC TGCAATAAAGATTCACTCTGCAGTACAGATAATATCTGGTTCCGAAATCATCACGGATGCTCTGAATGTAATCACGACGT AATCATTAACGGCAGAAAGCGCGGTGAAATAGGTAAAGGCCTCACCGGCAGGACTGTAATTGCTGAGGTGATAGAACCTG ATAACCGCTTATTTCAGATTCTGAAAACACGCGGCAAAGTTGCAGCACGTAAATACTGGCTGGAAAACATGAAAGGCATC AGTCGTGTAGAGCATCTTCTTCGCCGTATCAATGAAGGTCTGGTAGACCCTCTTGAAGCCGACAGAATCATCCCTCTGGA CGAAGACGAGCGCCTCAGCATCGATGATGTCTAA Protein sequence : MDKYNLKDALLFISRGDTHEILIETNQRTRPDVQSNLQELLKLYPDINPKVVSLSELQEAGQDEKNRGPKERIIHLKDLA DVSESEKKVLSYFETARKLGASDIHFLISESIFKVRMRIFGELQTVDEDQPALGYSLCATAILSMADVTETSFFPQREQD ARLSPQLMRKIGIFGARYSHRPTGDGLIAVMRLIPDDGDKVPTFKQLGFIPEQIRLLNIMLRRPEGKIVLSGPTGSGKST TLRSACRVYLDDNQGRHLLTIEDPLEGQILGATQTPIICDKSDEDAVKLAWSRAISSAMRLDPDAIMEGEMRDLISMMST TYAAQTGHIVLTTLHTNSALGIPERMITMGMNADLICDAQLLIGMISQRLVPTLCPSCRIPWEKRAPELSDDERDYLERH CNKDSLCSTDNIWFRNHHGCSECNHDVIINGRKRGEIGKGLTGRTVIAEVIEPDNRLFQILKTRGKVAARKYWLENMKGI SRVEHLLRRINEGLVDPLEADRIIPLDEDERLSIDDV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| YE3502 | YP_001007663.1 | putative type IV pilus protein | Virulence | YAPI | Protein | 7e-122 | 52 |
| YpsIP31758_3731 | YP_001402685.1 | type IV secretion system protein | Virulence | YAPI | Protein | 2e-122 | 52 |
| pilQ | CAF28490.1 | putative ATP binding protein | Virulence | YAPI | Protein | 1e-121 | 52 |
| pilQ | NP_458633.1 | nucleotide-binding protein | Virulence | SPI-7 | Protein | 8e-131 | 52 |
| pilQ | NP_807844.1 | nucleotide-binding protein | Virulence | SPI-7 | Protein | 8e-131 | 52 |
| pilQ | AAF14817.2 | PilQ | Virulence | SPI-7 | Protein | 6e-131 | 52 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SeHA_A0114 | YP_002043949.1 | ATP-binding protein | VFG2313 | Protein | 3e-122 | 52 |
