Gene Information

Name : SeHA_A0112 (SeHA_A0112)
Accession : YP_002043947.1
Strain :
Genome accession: NC_011081
Putative virulence/resistance : Virulence
Product : typeIV prepilin
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 78007 - 78621 bp
Length : 615 bp
Strand : -
Note : identified by match to protein family HMM PF08805

DNA sequence : 
ATGTTAGTAGAAAATATTAATACCACTTTAACTGGAAATAATAAGAAGAATGAGCCTCATGATAAAGGATGGGCAATTTT
GGAGCAGGGAACAATAGCGCTCGTTGTTCTTTTTGTTATAGTCGTTGTTCTGGGTAGTTTGTATGCGTTGCGTACAAGAG
CCAATGTGGCAACTGAAACCGCAAATATACAAACAATTATCACAAGTGCCCAGAGCCTGCTAAAAGGTAGCGATGGATAT
ACATTTACCAGCAGTGCCAAAATGACAGGTGCCCTCATTCAGATGGGTGTCATTCCCTCTGGGATGACCGTACAGGGCGA
CAAAACATCTGGTACAGCAACGCTCTATAACGCATGGGGCGGTGCTGTAACTGTTGCCCCGGCTTCAACATCAGGGTTCA
ACAACGGTTTTACCGTTACCTATGATAAAGTCCCACAGGATGCCTGTATCCAGATTGCCACACGAATCAGTAAAACTGGT
TTAACTAACGGCATTACCCTGAACAGTACTGCTCACAGTGATGGAAAAGTCACTACTGAAGAAGCCAGTACGCAATGCAA
GGCAGATAATGGCAGCACTGGTACAAACAAACTTATCTTCACCATCAATGGTTAA

Protein sequence : 
MLVENINTTLTGNNKKNEPHDKGWAILEQGTIALVVLFVIVVVLGSLYALRTRANVATETANIQTIITSAQSLLKGSDGY
TFTSSAKMTGALIQMGVIPSGMTVQGDKTSGTATLYNAWGGAVTVAPASTSGFNNGFTVTYDKVPQDACIQIATRISKTG
LTNGITLNSTAHSDGKVTTEEASTQCKADNGSTGTNKLIFTING

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YE3500 YP_001007661.1 putative type IV prepilin Virulence YAPI Protein 3e-44 57
pilS YP_001402683.1 type IV pilus biogenesis protein Virulence YAPI Protein 2e-45 56
pilS CAF28492.1 putative major pilin subunit Virulence YAPI Protein 4e-46 56
pilS AAC98887.1 PilS Virulence SPI-7 Protein 8e-36 52
pilS NP_458635.1 prepilin Virulence SPI-7 Protein 1e-35 52
pilS NP_807846.1 prepilin Virulence SPI-7 Protein 1e-35 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SeHA_A0112 YP_002043947.1 typeIV prepilin VFG2315 Protein 9e-45 57