Gene Information

Name : SeHA_A0111 (SeHA_A0111)
Accession : YP_002043946.1
Strain :
Genome accession: NC_011081
Putative virulence/resistance : Virulence
Product : lytic transglycosylase PilT
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0741
EC number : -
Position : 77437 - 77997 bp
Length : 561 bp
Strand : -
Note : identified by match to protein family HMM PF01464

DNA sequence : 
ATGTCAGGGGGTACAGTACCCCTCAGACTTATTTCATTAATCCTGCTTTTTTCTCTTATTCCACCCGCCCGAGCTTCATA
CGTAGCTCCCAAACAGATCTGGACCAACAAGTGGGACAATTGCTTTGCCGCTGCCGGCGCGCGCTATCAAATTGAACCAT
TATTATTGAAGGCTATTTCTGCCGGGGAATCTTCGTTGAGGCCGGGCGCAATTAATATAAATAAGGACAAAAAAACAGGT
AAAGCCAGTAGCACGGATTATGGGTTGATGCAAATAAACTCAACCCATATTCCAAAGCTGATAAATATGGGCGTAATAAA
AAAGTCTGAGGATTTAATTACCAAACCATGCCTTAATATCCATATAGGAAGCTGGATACTGGCAAGACATTTTCAGATAT
GTGGCGTCAGCTGGAATTGCCTTGGGTCATACAATGCCGGATTCCGTAAGGACAGACATGAAACAAGAGAGCAATATGCC
AATAAAATATGGAGAATTTATCGTGACATGAAAGGGATATGTCTTCCCGGACAGGGAGGCAGGCAATGCAGACAATCGTA
G

Protein sequence : 
MSGGTVPLRLISLILLFSLIPPARASYVAPKQIWTNKWDNCFAAAGARYQIEPLLLKAISAGESSLRPGAININKDKKTG
KASSTDYGLMQINSTHIPKLINMGVIKKSEDLITKPCLNIHIGSWILARHFQICGVSWNCLGSYNAGFRKDRHETREQYA
NKIWRIYRDMKGICLPGQGGRQCRQS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pilT NP_458636.1 putative membrane protein Virulence SPI-7 Protein 8e-45 68
pilT NP_807847.1 hypothetical protein Virulence SPI-7 Protein 8e-45 68
pilT AAC98888.1 PilT Virulence SPI-7 Protein 6e-45 68
iagB NP_457271.1 cell invasion protein Virulence SPI-1 Protein 4e-21 41
iagB NP_806480.1 cell invasion protein Virulence SPI-1 Protein 4e-21 41
iagB NP_461798.1 invasion protein precursor Virulence SPI-1 Protein 2e-21 41
iagB YP_217796.1 cell invasion protein Virulence SPI-1 Protein 2e-21 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SeHA_A0111 YP_002043946.1 lytic transglycosylase PilT VFG0539 Protein 7e-22 41