|
Name : SeHA_A0109 (SeHA_A0109) Accession : YP_002043944.1 Strain : Genome accession: NC_011081 Putative virulence/resistance : Virulence Product : shufflon protein B' Function : - COG functional category : - COG ID : - EC number : - Position : 75462 - 76808 bp Length : 1347 bp Strand : - Note : identified by match to protein family HMM PF04917 DNA sequence : ATGGGTAATCTGATGAAAAAATATGACCGAGGCTGGGCATCGCTGGAAACTGGCGCGGCTTTACTGATTGTTATGCTCCT GATTGCCTGGGGAGCGGGCATATGGCAGGACTATATTCAAACAAAAGGATGGCAAACTGAAGCACGTCTTGTCAGCAACT GGACCAGTGCGGCCCGCTCTTATATAGGGAAAAACTACACGACTCTCCAGGGCAGTAGTACCACAACAACTCCTGCCGTT ATCACGACAACCATGCTGAAAAATACCGGCTTTTTGTCCAGCGGGTTTACTGAGACAAACAGCGAGGGGCAGCGGTTACA GGCATATGTGGTTCGAAACGCCCAAAACCCGGAATTACTACAGGCAATGGTTGTATCCAGTGGTGGCACACCTTATCCAG TGAAAGCACTTATCCAGATGGCTAAGGATATTACCACTGGTCTTGGTGGATATATCCAGGACGGCAAAACAGCCACAGGT GCATTACGTTCCTGGTCAGTAGCTTTAAGTAATTATGGTGCCAAAAGCGGTAACGGGCATATTGCCGTATTGTTATCGAC AGATGAACTTAGTGGTGCAGCTGAGGACACTGATCGTCTTTACAGATTCCAGGTCAATGGTCGCCCTGACTTAAACAAAA TGCACACGGCCATTGATATGGGATCAAATAACCTGAATAACGTTGGGGCAGTAAATGCCCAGACAGGTAATTTCAGCGGC AATGTGAATGGTGTAAATGGCACTTTCAGCGGTCAGGTAAAAGGCAATAGCGGAAACTTTGACGTAAATGTCACCGCTGG CGGTGATATCAGAAGTAATAATGGTTGGTTAATTACTCGTAACAGTAAAGGCTGGCTCAATGAAACTCACGGTGGCGGAT TTTATATGTCCGATGGATCATGGGTTCGAAGTGTAAACAACAAGGGCATCTATACCGGCGGTCAGGTGAAAGGCGGTACT GTTCGGGCTGATGGTCGCCTTTATACTGGTGAATACTTACAACTGGAAAGAACTGCCGTTGCTGGCGCATCATGTTCGCC TAACGGCCTTGTAGGCCGCGATAATACAGGGGCAATACTTTCGTGCCAATCCGGTACCTGGAGAAAGGTAGGATCTGGTG AGCTTCAAATTGCTACAGCACAGGCCACAGGTTGGCGCTTTCCTGGAGCAACAGCTACCTGTCCAACTGGAAAACGTGTT ACAGGTGGCGGCGGAATATGCACCTCACGAACTGGTTACATATGGCTTACCAGGTCATTCCCATCAGCCAATAACTCATG GTCGGCTGCGTGCGATACAACCGAAGATCAGAATGGTTCAATAACTGTATATGCCATTTGCCAATAA Protein sequence : MGNLMKKYDRGWASLETGAALLIVMLLIAWGAGIWQDYIQTKGWQTEARLVSNWTSAARSYIGKNYTTLQGSSTTTTPAV ITTTMLKNTGFLSSGFTETNSEGQRLQAYVVRNAQNPELLQAMVVSSGGTPYPVKALIQMAKDITTGLGGYIQDGKTATG ALRSWSVALSNYGAKSGNGHIAVLLSTDELSGAAEDTDRLYRFQVNGRPDLNKMHTAIDMGSNNLNNVGAVNAQTGNFSG NVNGVNGTFSGQVKGNSGNFDVNVTAGGDIRSNNGWLITRNSKGWLNETHGGGFYMSDGSWVRSVNNKGIYTGGQVKGGT VRADGRLYTGEYLQLERTAVAGASCSPNGLVGRDNTGAILSCQSGTWRKVGSGELQIATAQATGWRFPGATATCPTGKRV TGGGGICTSRTGYIWLTRSFPSANNSWSAACDTTEDQNGSITVYAICQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pilV | NP_458638.1 | prepilin | Virulence | SPI-7 | Protein | 1e-84 | 55 |
| pilV | NP_807849.1 | prepilin | Virulence | SPI-7 | Protein | 1e-84 | 55 |
| pilV | AAC38069.1 | PilV | Virulence | SPI-7 | Protein | 9e-85 | 55 |
| YE3498 | YP_001007659.1 | putative type IV pilus protein | Virulence | YAPI | Protein | 1e-80 | 51 |
| YpsIP31758_3727 | YP_001402681.1 | shufflon protein | Not tested | YAPI | Protein | 3e-81 | 50 |
| pilV | CAF28494.1 | secondary type IV prepilin | Virulence | YAPI | Protein | 2e-80 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SeHA_A0109 | YP_002043944.1 | shufflon protein B' | VFG2317 | Protein | 5e-81 | 51 |
