|
Name : SNSL254_A0658 (SNSL254_A0658) Accession : YP_002039846.1 Strain : Salmonella enterica SL254 Genome accession: NC_011080 Putative virulence/resistance : Virulence Product : IbrA protein Function : - COG functional category : R : General function prediction only COG ID : COG3969 EC number : - Position : 671050 - 672285 bp Length : 1236 bp Strand : - Note : identified by match to protein family HMM PF01507 DNA sequence : ATGTCGGTTTATAAAGTTCCGCTCGAGCAAAATGTTCTGGAAGCGGCTCAAGAGCGTATAATGTGGACCCTGGAAACCTT ACCCCGGGTCTGCGTCTCATTTTCTGGTGGTAAAGATTCAGGACTTATGTTGCACCTGACGGCAACGTTGGCGCGCAAAA TGAATAAAAAGATCCATGTTCTCTTCATTGACTGGGAAGCGCAATTCTCCTGTACCATCGCCTATATTGAATCGTTACGT GAATACTACGCGGACGTTATTGAGCGTTTTTATTGGGTCGCATTACCCTTAACCACACAAAATTCCCTTTCACAATACCA GCCGGAGTGGCAGTGTTGGCAGCCGGGTACCGACTGGGTACGACAACCGCCAGAAGATGCGATTACCGATCCGGCCTTTT TTTCCTTTTATCAACACGGCATGACCTTTGAACAGTTCGTTCGCGATTTTGCCGACTGGTTTTCAGAAAAACGTCCTGCC GCTATGCTGGTCGGTATTCGTTCCGACGAATCCTATAACCGATTTGCCGCTATCGCTAACTCGCATAAGCTGCGCTTTGC CGACGATAAGCCCTGGACCACGTTAGCCCCTAAAGGGCACACCTGGTATATCTATCCCATCTATGACTGGAAAACCGCAG ATATCTGGACCTGGTTCGCCAAAACAGGTAAACCATGTAACCCTTTGTATAATTTGATGTATCAGGCTGGAGTGCCGCCC CGTTACATGCGTATTTGCGAACCGTTCGGCCCGGAACAACGACAGGGGTTATGGCTGTATCATGTTATCGAACCTGAGCG CTGGGCGGCCATGTGCGCCAGAGTCAGCGGCGCACTCAGCGGAGGAATATACGCCGGACAAGACAGCCATTTTTACGGCC ACCGGAAAATTTTAAAACCCGATCACCTTAACTGGGAAGAGTACGCGCTGCTCCTGCTACACAGTATGCCTGAAGTCACT GCCGAACATTACCGTAATAAAATCGCCGTTTATTTGCAGTGGTATAAGAAAAAAGGCATGAACACTATTCCACAAACGCA GCATGGCGATATCGGATCGCGCGATATTCCGTCGTGGCGACGGATCTGCAAAGTATTACTGAACAATGATTACTGGTGCC GGGCGCTGTCATTCAGTCCGACAAAACCTAAGAATTACCAGCGTTATAACGAACGTATGAAAGCTAAACGCCAGGAATGG GGGATCTTATGCAACACCGACTCACAACCGAAATAA Protein sequence : MSVYKVPLEQNVLEAAQERIMWTLETLPRVCVSFSGGKDSGLMLHLTATLARKMNKKIHVLFIDWEAQFSCTIAYIESLR EYYADVIERFYWVALPLTTQNSLSQYQPEWQCWQPGTDWVRQPPEDAITDPAFFSFYQHGMTFEQFVRDFADWFSEKRPA AMLVGIRSDESYNRFAAIANSHKLRFADDKPWTTLAPKGHTWYIYPIYDWKTADIWTWFAKTGKPCNPLYNLMYQAGVPP RYMRICEPFGPEQRQGLWLYHVIEPERWAAMCARVSGALSGGIYAGQDSHFYGHRKILKPDHLNWEEYALLLLHSMPEVT AEHYRNKIAVYLQWYKKKGMNTIPQTQHGDIGSRDIPSWRRICKVLLNNDYWCRALSFSPTKPKNYQRYNERMKAKRQEW GILCNTDSQPK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ibrA | ADD91735.1 | putative phosphoadenosine phosphosulfate reductase IbrA | Not tested | PAI-I AL862 | Protein | 2e-124 | 61 |
| Z1643 | AAQ19139.1 | putative phosphoadenosine phosphosulfate reductase | Not tested | PAI I CL3 | Protein | 8e-125 | 61 |
| APECO1_3502 | YP_854308.1 | hypothetical protein | Not tested | PAI I APEC-O1 | Protein | 1e-125 | 60 |
| c5209 | NP_757057.1 | hypothetical protein | Not tested | PAI II CFT073 | Protein | 1e-125 | 60 |
| z1203 | CAD33763.1 | Z1203 protein | Not tested | PAI I 536 | Protein | 7e-124 | 60 |
| Z1203 | NP_286738.1 | hypothetical protein | Not tested | TAI | Protein | 2e-124 | 60 |
| ORF_31 | AAZ04441.1 | conserved hypothetical protein | Not tested | PAI I APEC-O1 | Protein | 9e-126 | 60 |
| Z1643 | NP_287146.1 | hypothetical protein | Not tested | TAI | Protein | 2e-124 | 60 |
| STY4583 | NP_458667.1 | conserved hypothetical protein | Not tested | SPI-7 | Protein | 2e-125 | 58 |
| t4277 | NP_807875.1 | hypothetical protein | Not tested | SPI-7 | Protein | 2e-125 | 58 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SNSL254_A0658 | YP_002039846.1 | IbrA protein | VFG1504 | Protein | 4e-124 | 60 |
