|
Name : SNSL254_A4842 (SNSL254_A4842) Accession : YP_002043732.1 Strain : Salmonella enterica SL254 Genome accession: NC_011080 Putative virulence/resistance : Virulence Product : phage transcriptional regulator, AlpA Function : - COG functional category : K : Transcription COG ID : COG3311 EC number : - Position : 4717599 - 4717859 bp Length : 261 bp Strand : + Note : identified by match to protein family HMM PF05930 DNA sequence : ATGCATGATATTTCTGTTTCTGCGCCAGCTCCGGCTGCGCCATTATTTCCTGTGCTGAACCAGCATGAGCGATTTTTACG TCTTCCCGAGGTTATGCATTTATGCGGCTTGTCCCGCTCAACTATATACGACCTGATAAGCCGCGATGCTTTCCCGAAGC AGATCCCGCTTGGTGGTAAAAATGTTGCCTGGGCACAGTCAGAGGTAAGCGCATGGATGGCGGATCGTATAAGTGCCCGC GGACGGGGATGTGATGCATAA Protein sequence : MHDISVSAPAPAAPLFPVLNQHERFLRLPEVMHLCGLSRSTIYDLISRDAFPKQIPLGGKNVAWAQSEVSAWMADRISAR GRGCDA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC1809 | NP_231443.1 | transcriptional regulator | Not tested | VPI-2 | Protein | 1e-11 | 45 |
| VC0395_A1406 | YP_001217349.1 | transcriptional regulator | Not tested | VPI-2 | Protein | 1e-11 | 45 |
| VPI2_0041 | ACA01856.1 | predicted transcriptional regulator | Not tested | VPI-2 | Protein | 8e-12 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SNSL254_A4842 | YP_002043732.1 | phage transcriptional regulator, AlpA | VFG1141 | Protein | 4e-12 | 45 |
