Gene Information

Name : SNSL254_A4668 (SNSL254_A4668)
Accession : YP_002043570.1
Strain : Salmonella enterica SL254
Genome accession: NC_011080
Putative virulence/resistance : Virulence
Product : repressor protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4555556 - 4555861 bp
Length : 306 bp
Strand : +
Note : identified by match to protein family HMM PF03333

DNA sequence :
ATGGATAATAGTGTCATTCAGCGAAACAGAGTGAGCGATCTCATTAATAATGAGATCTCTTTCAAGAAAAAAAAGCACCA
TTCTTTTGGTGATATGTCGGAAAATCGTTTCTGGCTGTTGATTGAAATTTCACCCATTCACAGTGAAAAAGTGATTGCCG
CGTTAAAAGATCATCTTGTGTTGGGCTACACAAGGCGGGAAGCATGTGAGCGCAATGGAGTGGCGGTTGGATATTTTTCA
TTAAGTCTGGCGAAAATTATTAGAATTGAAAATGCGGTTACATTACTGACCATGTTTCAGGAATGA

Protein sequence :
MDNSVIQRNRVSDLINNEISFKKKKHHSFGDMSENRFWLLIEISPIHSEKVIAALKDHLVLGYTRREACERNGVAVGYFS
LSLAKIIRIENAVTLLTMFQE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pixB CAE85162.1 PixB protein Not tested PAI V 536 Protein 4e-12 51
afaA AAK16196.1 AfaA Virulence PAI-I AL862 Protein 6e-18 49
afaA ADD91741.1 putative transcriptional regulator AfaA-VIII Not tested PAI-I AL862 Protein 6e-18 49