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Name : SNSL254_A4389 (SNSL254_A4389) Accession : YP_002043323.1 Strain : Salmonella enterica SL254 Genome accession: NC_011080 Putative virulence/resistance : Unknown Product : late control gene D protein Function : - COG functional category : R : General function prediction only COG ID : COG3500 EC number : - Position : 4260657 - 4261826 bp Length : 1170 bp Strand : + Note : identified by match to protein family HMM PF05954 DNA sequence : ATGATTACGGGCATGACCATTGACGCCGGTGCCAGCTTTGCACCGGCATTTATGCTGACGCTGAACAGCCAGGACATTAC CAGCAATTTTAGTGACCGGCTGATTTCTCTCACCATGACCGACAACCGGGGTTTTGAGGCTGACCAGCTCGACATTGAGC TCGACGACACCGACGGTAAAGTTGAGTTACCCCTGCGCGGGGCGGTGCTGACGCTGTGGCTTGGCTGGCAGGGCTCGGCA TTGCTGAATAAAGGCGATTTCACGGTCGATGAGATTGAGCACCGGGGCGCACCTGATACCCTGACCATTCGGGCGCGTAG TGCAGATTTTCGCGGAACGCTCAATTCACGGCGTGAGGAGTCATGGCACGACACCACCCTCGGTGAGCTGGTCAGCACCA TTGCAAAGCGCAATAAACTGACGGCCAGTGTCGCGGATTCGCTGAAAAAAATACCGGTACCGCATATCGACCAGTCGCAG GAGTCCGACGCCGTATTTCTGACCCGGCTGGCTGACCGCAATGGGGCGGCGGTGTCAGTGAAAGCGGGTAAACTCCTGTT TCTGAAAGCCGGTAGTGCGATGACGGCCAGTGGCAAGCCCGTCCCGCAAATGACCCTGACCCGCAGCGATGGCGACCGTC ATCAGTTTGCCATTGCTGACCGTGGTGCTTACACCGGCGTAACAGCAAAATGGTTGCACACCAAAGACCCGAAGCCGCAA AAGCAAAAAGTGACGCTGAAACGTAAGCCAAAAGAGAAGCACCTGCGCGCACTGGAGCATCCGAAAGCAAAGCTGGTCAG CAAAAAGACAAAGGCCAAAAAAGAGCCGGAAGCGCGTGAGGGTGAGTATATGGCCGGTGAGGCTGATAACGTGCTGGCGC TGACGACGGTCTACGCATCAAAGGCGCAGGCGATGCGCGCAGCTCAGGCTAAATGGGATAAGCTGCAGCGAGGCGTTGCG GAGTTTTCAATTACGCTGGCGCTTGGTAGGGCTGATTTATTCCCTGAGACACCGGTGCGTGTGTCGGGCTTTAAGCGTGT CATAGACGAGCAGGCATGGTTAATCAGTAAAGTGACTCACAGCCTGAATAATAGTGGCTTCACGACGGGCTTAGAGCTTG AGGTTAAGCTCTCTGACGTAGAGTATAAAGCGGAAGATGATGATGGGTGA Protein sequence : MITGMTIDAGASFAPAFMLTLNSQDITSNFSDRLISLTMTDNRGFEADQLDIELDDTDGKVELPLRGAVLTLWLGWQGSA LLNKGDFTVDEIEHRGAPDTLTIRARSADFRGTLNSRREESWHDTTLGELVSTIAKRNKLTASVADSLKKIPVPHIDQSQ ESDAVFLTRLADRNGAAVSVKAGKLLFLKAGSAMTASGKPVPQMTLTRSDGDRHQFAIADRGAYTGVTAKWLHTKDPKPQ KQKVTLKRKPKEKHLRALEHPKAKLVSKKTKAKKEPEAREGEYMAGEADNVLALTTVYASKAQAMRAAQAKWDKLQRGVA EFSITLALGRADLFPETPVRVSGFKRVIDEQAWLISKVTHSLNNSGFTTGLELEVKLSDVEYKAEDDDG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY4601 | NP_458684.1 | putative regulator of late gene expression | Not tested | SPI-7 | Protein | 9e-92 | 55 |
| t4295 | NP_807892.1 | regulator of late gene expression | Not tested | SPI-7 | Protein | 9e-92 | 55 |
| unnamed | ABR13490.1 | phage late control D | Not tested | PAGI-6 | Protein | 1e-56 | 41 |
