|
Name : SNSL254_A4372 (SNSL254_A4372) Accession : YP_002043308.1 Strain : Salmonella enterica SL254 Genome accession: NC_011080 Putative virulence/resistance : Unknown Product : glycoside hydrolase Function : - COG functional category : R : General function prediction only COG ID : COG3772 EC number : - Position : 4247166 - 4247675 bp Length : 510 bp Strand : + Note : identified by match to protein family HMM PF00959 DNA sequence : GTGGGCTCATTCGTTAAACGTTGCAGTGTGGCCGTCGTGCTGGCGCTGGCGGCACTGGTGCCTGATTTTCGTTTGCTTCA CACCTCGCCGGAGGGGCTCGCGCTGATTGCCGACCTCGAGGGGTGCCGGTTGCGCCCTTACCAGTGCAGCGCGGGCGTGT GGACGTCAGGCATCGGCCACACTGCCGGGGTGGTACCGAAACGGGATATCACCGAGAAGGAAGCCGCCGCGAATCTGGTC GCCGACGTGCTGAATGTTGAGAAACGACTCGCGGTCTGTGTGCCGGTGGATATGCCACCCGCCGTCTATGACGCGCTGGT CAGCTTCGCTTTTAACGTCGGCACCGGCGCGGCCTGTCGCTCAACACTGGTGTATCACCTGAAACACCGGCAATGGTGGC AAGCCTGTGACCAGCTCACCCGCTGGGTGTTTGTGAATGGTGAGCGTAATACCGGGCTCGAAAATCGCCGCTTTCGCGAG CGCACTTACTGCCTGAAGGGGGCGAAATGA Protein sequence : MGSFVKRCSVAVVLALAALVPDFRLLHTSPEGLALIADLEGCRLRPYQCSAGVWTSGIGHTAGVVPKRDITEKEAAANLV ADVLNVEKRLAVCVPVDMPPAVYDALVSFAFNVGTGAACRSTLVYHLKHRQWWQACDQLTRWVFVNGERNTGLENRRFRE RTYCLKGAK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| nucD2 | NP_458702.1 | putative lysozyme | Not tested | SPI-7 | Protein | 9e-38 | 65 |
| nucD | NP_807909.1 | lysozyme | Not tested | SPI-7 | Protein | 9e-38 | 65 |
