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Name : SNSL254_A4366 (SNSL254_A4366) Accession : YP_002043302.1 Strain : Salmonella enterica SL254 Genome accession: NC_011080 Putative virulence/resistance : Unknown Product : phage major capsid protein P2 family Function : - COG functional category : - COG ID : - EC number : - Position : 4244247 - 4245407 bp Length : 1161 bp Strand : + Note : identified by match to protein family HMM PF05125; match to protein family HMM TIGR01551 DNA sequence : ATGCGTAAAGACACCCGTTTTAAATTCAATCAGTACCTGAGCCGTATCGCCGAACTGAACGGCATCGAGGTCAGCGACCT CAACAAAAAATTCACCGTCGAGCCGTCGGTGACGCAGACCCTGTTTGACAAAATCCAGCAATCATCCAGCTTCCTGAAGC TCATCAACATGGTGACGGTTGGCGAGCTGACCGAGGAAAAAGTCGGCATCGATGTGACCGGATCCATTGCCAGCACCGCT GATACCGACGGTGGCGTCGAGCGTAAGACCGCTGATTTCGCGAAAATGGATGCGTACCGCTATTTCTGTCATCCGGTGAA CTTCGACTATCACCTGAAGTACAACAAGCTCGACCTGTGGGCGCGTTTTCAGGATTTCCAGATTCGGATCCGTAACGCCA TCATCAAGCGTCAGGCGCTGGATTACATCACCATCGGCTTTAACGGCGTGAGCCGGGCGGCGACGTCTGACCGTAGCAAA AACCCGTTACTTCAAGATGTGGCTGTCGGCTGGTTGCAGAAATACCGCAACGACGCGCCTGAGCGTGTGATGTCCAGCAT CACCGACGCTGAAGGTACCGTGATTTCGAACACCATCAAAGTAGGTAAAGGGGGGCATTACGCCAACCTCGACGCGCTGG TCATGGATGCTTTCGAGTCGCTGGTCGCGGAAATTCACCGCGAGAACCCGGAAATGGTTGTCATCTGTGGTCGCCGTATC CTGACCGACAAATACTTCCCGATGATTAACAAGTTCCAGGCAAACAGCGAACAGCTCGCCGGTGAGCTGATTATCAGCCA GAAAACCATCGGCCAGCTTCAGGCGGTGCGCGCGCCATTCTTCCCGGCAAACAGCGTTTTCATCACCACGCTGGATAACA TTTCGATTTATCTGTACGAGGACGGTCACCGCCGCCACATCGTCGAAAATCCGAAACTCGACCAGGTGGAAAACTACGAA CAGGTCAAAGTCGATTTCGTTATCGAGGACTACGAGGCCGGTTGCCTGATTGAAAATATCGAGATCCTCGAACCGGAAGA ACCCGCCACCTCGGAACCAGTGAGCGCGGAAGTCTTCGCGGCGGCAATGGTCAAAGCGATGCAGTCTCTGACAGGCAGCG CACCGGCTGAAACCGGCACCACTGACGGCAAGGAGGCATAA Protein sequence : MRKDTRFKFNQYLSRIAELNGIEVSDLNKKFTVEPSVTQTLFDKIQQSSSFLKLINMVTVGELTEEKVGIDVTGSIASTA DTDGGVERKTADFAKMDAYRYFCHPVNFDYHLKYNKLDLWARFQDFQIRIRNAIIKRQALDYITIGFNGVSRAATSDRSK NPLLQDVAVGWLQKYRNDAPERVMSSITDAEGTVISNTIKVGKGGHYANLDALVMDAFESLVAEIHRENPEMVVICGRRI LTDKYFPMINKFQANSEQLAGELIISQKTIGQLQAVRAPFFPANSVFITTLDNISIYLYEDGHRRHIVENPKLDQVENYE QVKVDFVIEDYEAGCLIENIEILEPEEPATSEPVSAEVFAAAMVKAMQSLTGSAPAETGTTDGKEA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY4625 | NP_458707.1 | putative major capsid protein | Not tested | SPI-7 | Protein | 1e-91 | 58 |
| t4319 | NP_807914.1 | major capsid protein | Not tested | SPI-7 | Protein | 1e-91 | 58 |
| unnamed | ABR13466.1 | predicted major capsid protein | Not tested | PAGI-6 | Protein | 2e-71 | 48 |
