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Name : SNSL254_A4365 (SNSL254_A4365) Accession : YP_002043301.1 Strain : Salmonella enterica SL254 Genome accession: NC_011080 Putative virulence/resistance : Unknown Product : phage capsid scaffolding protein GpO Function : - COG functional category : - COG ID : - EC number : - Position : 4243352 - 4244215 bp Length : 864 bp Strand : + Note : identified by match to protein family HMM PF05929 DNA sequence : ATGGCTAAAAAAATTTCGAAATGGTTTCGCATCGGCGTCGAGGGGGACACCTGCGACGGTCGCGTCATCAGTGCGACCGA TATTCAGGAAATGGCCGACGGCTTTGACCCGCGCGTCTACGGCTGTCGCATTAACCTCGAGCATATCCGCAGCGTTATTC CCGACAGCCCGTTTTGTCGCTATGGCGACGTCACGGAAGTGAAAGCGGAAGTGATCGACGAAGATTCGGCACTTAACGGC AAGCTGGCGCTGTTCGGCAAAATTGCCCCGCTCGACAACCTGCTCGCGATGCTGGCGAAAGGCCAGAAGGTTTACACCTC GATGGAAATTCGTCCTAACTTTGCCAACACCGGCAAATGTCACCTCATCGGGCTGGCGGTAACCGATGACCCTGCGAGCC TCGGTACCGAATACCTGCAATTCTGCTCCCGCGCACAGCAAAACCCACTGGCAGGGAAGAAAGACCAGCCGGGCGACCTG TTCTCAGTGGCAACTCTTGCCGAGCTGGAATTCGAAGACCTGCCCGACAACCTGCTGAGCAAAATCAGCGACACCGTGAA AGGCATCTTCAGCCGTAAACAGACTGACGACGATGCGCGTTTCGGTGATGTACATGAAGCCGTGACCGCCATCGCCGAAC GGGTGCAGATTGGCGGCGAAAGCGCTGAGGTGCGTTTCAGGGCCATTGAAACCGAACTCGCCGACGTCAAAAAAGCGCTG GCCGAACAGGCCGATGCCACCTCGCAGCAATTCAGCACCCTGACCACCACGCTGGAAAATACCGAAAGCAGATCACAGGC GCGCCGCAAGTTAAGTACCGGCGGTGACGGTGATTCGGCGGTCTCCACGCTGACCGACTGCTAA Protein sequence : MAKKISKWFRIGVEGDTCDGRVISATDIQEMADGFDPRVYGCRINLEHIRSVIPDSPFCRYGDVTEVKAEVIDEDSALNG KLALFGKIAPLDNLLAMLAKGQKVYTSMEIRPNFANTGKCHLIGLAVTDDPASLGTEYLQFCSRAQQNPLAGKKDQPGDL FSVATLAELEFEDLPDNLLSKISDTVKGIFSRKQTDDDARFGDVHEAVTAIAERVQIGGESAEVRFRAIETELADVKKAL AEQADATSQQFSTLTTTLENTESRSQARRKLSTGGDGDSAVSTLTDC |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13465.1 | putative capsid scaffold | Not tested | PAGI-6 | Protein | 2e-40 | 45 |
| STY4626 | NP_458708.1 | putative capsid protein | Not tested | SPI-7 | Protein | 9e-47 | 43 |
| t4320 | NP_807915.1 | capsid protein | Not tested | SPI-7 | Protein | 9e-47 | 43 |
