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Name : SNSL254_A4363 (SNSL254_A4363) Accession : YP_002043299.1 Strain : Salmonella enterica SL254 Genome accession: NC_011080 Putative virulence/resistance : Unknown Product : phage portal protein pbsx family Function : - COG functional category : R : General function prediction only COG ID : COG5518 EC number : - Position : 4240381 - 4241418 bp Length : 1038 bp Strand : - Note : identified by match to protein family HMM PF04860; match to protein family HMM TIGR01540 DNA sequence : ATGAGCAAGAAACGCAACAAGCGCCAGCAGCCGCCGCGCACCCAAAACCACACCGCCGCACCAGCGCAAAGCATGGAGGC ATTCACCTTTGGTGAGCCAACGCCGGTACTCGACCGCCGCGATATTCTCGATTATGTCGAGTGTATCAACAACGGCCAGT GGTACGAGCCGCCGGTGAGCTTCTCCGGGCTGGCGAAAAGTATGCGCGCCGCCGTGCACCACAGCTCACCGATTTACGTA AAGCGTAATATTCTGGTGTCGACCTACATCCCGCACCCGTTGTTATCCCGTCAGGACTTCACCCGGTTTGCGCTCGACTA TCTGGTGTTTGGCAATGCTTTTATCGAAGAGCGTCGCAGCCTGACCGGCAAGCCGTTAAAACTGGAAACCTCACCGGCGA AATACACCCGCCGTGGCATCGAGGAGGACGTGTACTGGTATATTCAGTCCTACACGCAGCCGCACCAGTTCGCGCCCGGC TCCGTCTTCCACCTGCTCGAGCCCGATATTAATCAGGAGCTTTACGGGATGCCGGAATACCTGAGCGCACTCAATTCAGC CTGGCTGAATGAATCAGCGACCCTGTTCCGTCGCAAGTATTACCAGAACGGCGCGCATGCGGGTTACATCATGTATGTGA CCGACGCCGCGCAAAGCAGCACCGACGTCGAGGCACTGCGAAAGGCGATGCGCGACTCGAAAGGGCTCGGCAATTTTAAG AACCTGTTTTTCTACGCCCCTAATGGTAAAGCAGACGGGATTAAAATTGTGCCACTGAGCGAAGTCGCCACGAAGGATGA TTTTTTTAATATCAAGAAAGTCAGCGCCGCTGACCTGCTCGACGCGCACCGCATCCCATTCCAGCTTATGGGCGGTAAGC CCGATAACGTCGGCTCAGTGGGTGACGTTGAGAAGGTGGCAAAGGTCTTTGTACGTAACGAACTGACCCCGCTACAGGCG CGGTTTATGGAGTTGAACGAGTGGGCGGGTGAAGAGATTATCCGCTTCGAAAAATATAGCCTCGGCGACGACGAGTAA Protein sequence : MSKKRNKRQQPPRTQNHTAAPAQSMEAFTFGEPTPVLDRRDILDYVECINNGQWYEPPVSFSGLAKSMRAAVHHSSPIYV KRNILVSTYIPHPLLSRQDFTRFALDYLVFGNAFIEERRSLTGKPLKLETSPAKYTRRGIEEDVYWYIQSYTQPHQFAPG SVFHLLEPDINQELYGMPEYLSALNSAWLNESATLFRRKYYQNGAHAGYIMYVTDAAQSSTDVEALRKAMRDSKGLGNFK NLFFYAPNGKADGIKIVPLSEVATKDDFFNIKKVSAADLLDAHRIPFQLMGGKPDNVGSVGDVEKVAKVFVRNELTPLQA RFMELNEWAGEEIIRFEKYSLGDDE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY4628 | NP_458710.1 | probable capsid portal protein | Not tested | SPI-7 | Protein | 2e-107 | 62 |
| t4321 | NP_807917.1 | capsid portal protein | Not tested | SPI-7 | Protein | 2e-107 | 62 |
| unnamed | ABR13463.1 | predicted capsid packaging protein | Not tested | PAGI-6 | Protein | 2e-80 | 51 |
