Gene Information

Name : SNSL254_A4040 (SNSL254_A4040)
Accession : YP_002043007.1
Strain : Salmonella enterica SL254
Genome accession: NC_011080
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3930122 - 3930649 bp
Length : 528 bp
Strand : -
Note : -

DNA sequence :
ATGGCGGGGCGCTATTTTCATGGTATCCCACATCAGAAGGGCAATATCATGAACAATCGTCGTGGTTTAACCGCCGTCCT
GGCGACGTTGATTACGTTTTCCCTGAGCGCTACGCCTGTGCTGGCGAATCCGGGAAATGGCAATGGCGGCGGACATAGTA
ATAACGCGGCTAATCAGGGTAATAACGGTAACGGGCATAAAGGAAATGCCGGGCAAAGAACGGAGCACCGTAAAAATGGC
GGTAAACCGGATCACGTCGAGTCGGACATTAGCTACGCTGTCGCCAGGCAACTGGCAGTGAATTTAGGGTTGACGGGTTA
TCAGTCTTTACCTCCGGGGATTGCGAAAAATCTGGCGAGAGGAAAACCGCTGCCGCCGGGAATCGCTAAAAAAACGGTGC
CGGCGTCTATGCTGGGACAATTACCTTATTATCCGGGCTATGAGTGGAAAATCGTTGGGGATAATCTGGTGCTGATCGCG
CTCAGTACCGCGGTGGTCACAGCGATTATTAATGGCGTATTTGATTAA

Protein sequence :
MAGRYFHGIPHQKGNIMNNRRGLTAVLATLITFSLSATPVLANPGNGNGGGHSNNAANQGNNGNGHKGNAGQRTEHRKNG
GKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPASMLGQLPYYPGYEWKIVGDNLVLIA
LSTAVVTAIINGVFD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cigR YP_218670.1 inner membrane protein Not tested SPI-3 Protein 2e-50 99
cigR NP_462661.1 inner membrane protein Virulence SPI-3 Protein 3e-51 99
cigR AAD16958.1 CigR Virulence SPI-3 Protein 2e-51 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SNSL254_A4040 YP_002043007.1 hypothetical protein VFG0573 Protein 8e-52 99